PlantSME Plant secondary metabolism enzyme database

Trocholejeunea sandvicensis (trocholejeunea_sandvicensis)

Imported from atlas release summary for Trocholejeunea sandvicensis.

526
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 144 10 POD (73) View species results
Terpenoid pathway 118 19 BAHD (52) View species results
Alkaloid pathway 115 18 NMT (19) View species results
Rosmarinic acid pathway 59 7 C4H (31) View species results
Flavonoid pathway 52 9 IFR (17) View species results
Steroid pathway 38 12 SMT1/SMT2/SMT3 (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 686 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 146 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
Reset
Gene Pathway Family Confidence Status
TRsanscaffold_20097050 Rosmarinic Acid C4H low borderline
TRsanscaffold_20097770 Rosmarinic Acid C4H medium pass
TRsanscaffold_20099470 Rosmarinic Acid C4H low borderline
TRsanscaffold_20099910 Rosmarinic Acid C4H low borderline
TRsanscaffold_20100550 Rosmarinic Acid C4H low borderline
TRsanscaffold_20100810 Rosmarinic Acid C4H low borderline
TRsanscaffold_20103230 Rosmarinic Acid C4H low borderline
TRsanscaffold_30106970 Rosmarinic Acid C4H medium pass
TRsanscaffold_30106980 Rosmarinic Acid C4H low borderline
TRsanscaffold_30106990 Rosmarinic Acid C4H low borderline
TRsanscaffold_30107000 Rosmarinic Acid C4H medium pass
TRsanscaffold_30110890 Rosmarinic Acid C4H medium pass
TRsanscaffold_30110900 Rosmarinic Acid C4H medium pass
TRsanscaffold_30112430 Rosmarinic Acid C4H low borderline
TRsanscaffold_30115580 Rosmarinic Acid C4H medium pass
TRsanscaffold_40121350 Rosmarinic Acid C4H low borderline
TRsanscaffold_40132850 Rosmarinic Acid C4H low borderline
TRsanscaffold_40136570 Rosmarinic Acid C4H medium pass
TRsanscaffold_40137730 Rosmarinic Acid C4H low borderline
TRsanscaffold_40139540 Rosmarinic Acid C4H low borderline
TRsanscaffold_40142500 Rosmarinic Acid C4H low borderline
TRsanscaffold_40144140 Rosmarinic Acid C4H low borderline
TRsanscaffold_40145690 Rosmarinic Acid C4H low borderline
TRsanscaffold_50147240 Rosmarinic Acid C4H low borderline
TRsanscaffold_50153870 Rosmarinic Acid C4H low borderline
TRsanscaffold_50154930 Rosmarinic Acid C4H low borderline
TRsanscaffold_50159500 Rosmarinic Acid C4H low borderline
TRsanscaffold_50159700 Rosmarinic Acid C4H low borderline
TRsanscaffold_50160560 Rosmarinic Acid C4H low borderline
TRsanscaffold_60166130 Rosmarinic Acid C4H medium pass
TRsanscaffold_60171040 Rosmarinic Acid C4H low borderline
TRsanscaffold_60173450 Rosmarinic Acid C4H low borderline
TRsanscaffold_60178510 Rosmarinic Acid C4H low borderline
TRsanscaffold_60178580 Rosmarinic Acid C4H low borderline
TRsanscaffold_60179850 Rosmarinic Acid C4H low borderline
TRsanscaffold_60181040 Rosmarinic Acid C4H medium pass
TRsanscaffold_60181080 Rosmarinic Acid C4H medium pass
TRsanscaffold_60181100 Rosmarinic Acid C4H low borderline
TRsanscaffold_60181110 Rosmarinic Acid C4H medium pass
TRsanscaffold_60181130 Rosmarinic Acid C4H low borderline
TRsanscaffold_60182070 Rosmarinic Acid C4H low borderline
TRsanscaffold_60183390 Rosmarinic Acid C4H low borderline
TRsanscaffold_60184280 Rosmarinic Acid C4H medium pass
TRsanscaffold_60185130 Rosmarinic Acid C4H low borderline
TRsanscaffold_60185180 Rosmarinic Acid C4H low borderline
TRsanscaffold_60186170 Rosmarinic Acid C4H low borderline
TRsanscaffold_70187540 Rosmarinic Acid C4H low borderline
TRsanscaffold_70197550 Rosmarinic Acid C4H medium pass
TRsanscaffold_80203270 Rosmarinic Acid C4H low borderline
TRsanscaffold_80205660 Rosmarinic Acid C4H low borderline