PlantSME Plant secondary metabolism enzyme database

Trocholejeunea sandvicensis (trocholejeunea_sandvicensis)

Imported from atlas release summary for Trocholejeunea sandvicensis.

863
Candidate Protein Records
526
Pathway-Level Records
1651
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 144 10 POD (73) View species results
Terpenoid pathway 118 19 BAHD (52) View species results
Alkaloid pathway 115 18 NMT (19) View species results
Rosmarinic acid pathway 59 7 C4H (31) View species results
Flavonoid pathway 52 9 IFR (17) View species results
Steroid pathway 38 12 SMT1/SMT2/SMT3 (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 686 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 146 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
Reset
Protein/Isoform Record Pathway Family Confidence Status
TRsanscaffold_100014220 Flavonoid IFS medium borderline
TRsanscaffold_100014260 Flavonoid IFS medium borderline
TRsanscaffold_100014270 Flavonoid IFS medium borderline
TRsanscaffold_100014290 Flavonoid IFS medium borderline
TRsanscaffold_100014460 Flavonoid IFS medium borderline
TRsanscaffold_100016110 Flavonoid IFS low borderline
TRsanscaffold_100016120 Flavonoid IFS low borderline
TRsanscaffold_100033810 Flavonoid IFS medium borderline
TRsanscaffold_100036580 Flavonoid IFS medium borderline
TRsanscaffold_10003770 Flavonoid IFS low borderline
TRsanscaffold_100038090 Flavonoid IFS medium borderline
TRsanscaffold_10010000 Flavonoid IFS low borderline
TRsanscaffold_10010040 Flavonoid IFS low borderline
TRsanscaffold_110042130 Flavonoid IFS medium borderline
TRsanscaffold_110042140 Flavonoid IFS medium borderline
TRsanscaffold_110044680 Flavonoid IFS low borderline
TRsanscaffold_110044710 Flavonoid IFS low borderline
TRsanscaffold_110044720 Flavonoid IFS low borderline
TRsanscaffold_120050520 Flavonoid IFS medium borderline
TRsanscaffold_120050650 Flavonoid IFS medium borderline
TRsanscaffold_120050820 Flavonoid IFS medium borderline
TRsanscaffold_120051110 Flavonoid IFS medium borderline
TRsanscaffold_130055210 Flavonoid IFS medium borderline
TRsanscaffold_170060910 Flavonoid IFS low borderline
TRsanscaffold_20064030 Flavonoid IFS medium borderline
TRsanscaffold_20064360 Flavonoid IFS medium borderline
TRsanscaffold_20065760 Flavonoid IFS medium borderline
TRsanscaffold_20065890 Flavonoid IFS medium borderline
TRsanscaffold_20067470 Flavonoid IFS medium borderline
TRsanscaffold_20067480 Flavonoid IFS low borderline
TRsanscaffold_20072640 Flavonoid IFS low borderline
TRsanscaffold_20072700 Flavonoid IFS low borderline
TRsanscaffold_20082400 Flavonoid IFS low borderline
TRsanscaffold_20092000 Flavonoid IFS medium borderline
TRsanscaffold_20092810 Flavonoid IFS medium borderline
TRsanscaffold_20095700 Flavonoid IFS medium borderline
TRsanscaffold_20097770 Flavonoid IFS medium borderline
TRsanscaffold_20099470 Flavonoid IFS low borderline
TRsanscaffold_20100550 Flavonoid IFS medium borderline
TRsanscaffold_30110900 Flavonoid IFS medium borderline
TRsanscaffold_30115580 Flavonoid IFS medium borderline
TRsanscaffold_40121350 Flavonoid IFS medium borderline
TRsanscaffold_40132850 Flavonoid IFS low borderline
TRsanscaffold_40136570 Flavonoid IFS medium borderline
TRsanscaffold_40139670 Flavonoid IFS low borderline
TRsanscaffold_40142500 Flavonoid IFS low borderline
TRsanscaffold_40145690 Flavonoid IFS low borderline
TRsanscaffold_50154930 Flavonoid IFS low borderline
TRsanscaffold_50156060 Flavonoid IFS low borderline
TRsanscaffold_50159500 Flavonoid IFS medium borderline