PlantSME Plant secondary metabolism enzyme database

Trocholejeunea sandvicensis (trocholejeunea_sandvicensis)

Imported from atlas release summary for Trocholejeunea sandvicensis.

526
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 144 10 POD (73) View species results
Terpenoid pathway 118 19 BAHD (52) View species results
Alkaloid pathway 115 18 NMT (19) View species results
Rosmarinic acid pathway 59 7 C4H (31) View species results
Flavonoid pathway 52 9 IFR (17) View species results
Steroid pathway 38 12 SMT1/SMT2/SMT3 (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 686 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 146 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
TRsanscaffold_10000600 Phenylpropanoid 4CL medium pass
TRsanscaffold_100039860 Phenylpropanoid 4CL low borderline
TRsanscaffold_10007890 Phenylpropanoid 4CL medium pass
TRsanscaffold_10007980 Phenylpropanoid 4CL medium pass
TRsanscaffold_110041990 Phenylpropanoid 4CL low borderline
TRsanscaffold_120051830 Phenylpropanoid 4CL low borderline
TRsanscaffold_20070540 Phenylpropanoid 4CL medium pass
TRsanscaffold_30104990 Phenylpropanoid 4CL low borderline
TRsanscaffold_40130210 Phenylpropanoid 4CL low borderline
TRsanscaffold_60164720 Phenylpropanoid 4CL low borderline
TRsanscaffold_60168610 Phenylpropanoid 4CL low borderline
TRsanscaffold_60180720 Phenylpropanoid 4CL medium pass
TRsanscaffold_60180730 Phenylpropanoid 4CL medium pass
TRsanscaffold_60180750 Phenylpropanoid 4CL medium pass
TRsanscaffold_60182910 Phenylpropanoid 4CL medium pass
TRsanscaffold_60183320 Phenylpropanoid 4CL low borderline
TRsanscaffold_70189890 Phenylpropanoid 4CL low borderline
TRsanscaffold_70195810 Phenylpropanoid 4CL low borderline
TRsanscaffold_80210280 Phenylpropanoid 4CL low borderline
TRsanscaffold_90216640 Phenylpropanoid 4CL medium pass
TRsanscaffold_90217590 Phenylpropanoid 4CL low borderline
TRsanscaffold_90223930 Phenylpropanoid 4CL medium pass
TRsanscaffold_100014220 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_100014260 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_100014270 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_100014290 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_100014460 Phenylpropanoid C3'H/CYP98A low borderline
TRsanscaffold_100014680 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_100016110 Phenylpropanoid C3'H/CYP98A low borderline
TRsanscaffold_100016120 Phenylpropanoid C3'H/CYP98A low borderline
TRsanscaffold_100033800 Phenylpropanoid C3'H/CYP98A low borderline
TRsanscaffold_100033810 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_100036580 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_10003770 Phenylpropanoid C3'H/CYP98A low borderline
TRsanscaffold_100038090 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_10006290 Phenylpropanoid C3'H/CYP98A high pass
TRsanscaffold_10009320 Phenylpropanoid C3'H/CYP98A low borderline
TRsanscaffold_10010000 Phenylpropanoid C3'H/CYP98A low borderline
TRsanscaffold_10010040 Phenylpropanoid C3'H/CYP98A low borderline
TRsanscaffold_110041950 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_110042130 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_110042140 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_110044680 Phenylpropanoid C3'H/CYP98A low borderline
TRsanscaffold_110044710 Phenylpropanoid C3'H/CYP98A low borderline
TRsanscaffold_110044720 Phenylpropanoid C3'H/CYP98A low borderline
TRsanscaffold_110045360 Phenylpropanoid C3'H/CYP98A low borderline
TRsanscaffold_110049110 Phenylpropanoid C3'H/CYP98A low borderline
TRsanscaffold_120050520 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_120050650 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_120050820 Phenylpropanoid C3'H/CYP98A medium pass