PlantSME Plant secondary metabolism enzyme database

Trocholejeunea sandvicensis (trocholejeunea_sandvicensis)

Imported from atlas release summary for Trocholejeunea sandvicensis.

863
Candidate Protein Records
526
Pathway-Level Records
1651
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 144 10 POD (73) View species results
Terpenoid pathway 118 19 BAHD (52) View species results
Alkaloid pathway 115 18 NMT (19) View species results
Rosmarinic acid pathway 59 7 C4H (31) View species results
Flavonoid pathway 52 9 IFR (17) View species results
Steroid pathway 38 12 SMT1/SMT2/SMT3 (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 686 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 146 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
TRsanscaffold_60171040 Rosmarinic Acid C4H low borderline
TRsanscaffold_60173450 Rosmarinic Acid C4H low borderline
TRsanscaffold_60178510 Rosmarinic Acid C4H low borderline
TRsanscaffold_60178580 Rosmarinic Acid C4H low borderline
TRsanscaffold_60179850 Rosmarinic Acid C4H low borderline
TRsanscaffold_60181040 Rosmarinic Acid C4H medium pass
TRsanscaffold_60181080 Rosmarinic Acid C4H medium pass
TRsanscaffold_60181100 Rosmarinic Acid C4H low borderline
TRsanscaffold_60181110 Rosmarinic Acid C4H medium pass
TRsanscaffold_60181130 Rosmarinic Acid C4H low borderline
TRsanscaffold_60182070 Rosmarinic Acid C4H low borderline
TRsanscaffold_60183390 Rosmarinic Acid C4H low borderline
TRsanscaffold_60184280 Rosmarinic Acid C4H medium pass
TRsanscaffold_60185130 Rosmarinic Acid C4H low borderline
TRsanscaffold_60185180 Rosmarinic Acid C4H low borderline
TRsanscaffold_60186170 Rosmarinic Acid C4H low borderline
TRsanscaffold_70187540 Rosmarinic Acid C4H low borderline
TRsanscaffold_70197550 Rosmarinic Acid C4H medium pass
TRsanscaffold_80203270 Rosmarinic Acid C4H low borderline
TRsanscaffold_80205660 Rosmarinic Acid C4H low borderline
TRsanscaffold_80206890 Rosmarinic Acid C4H low borderline
TRsanscaffold_80208440 Rosmarinic Acid C4H low borderline
TRsanscaffold_80208880 Rosmarinic Acid C4H low borderline
TRsanscaffold_90215480 Rosmarinic Acid C4H medium pass
TRsanscaffold_90216840 Rosmarinic Acid C4H low borderline
TRsanscaffold_90216860 Rosmarinic Acid C4H medium pass
TRsanscaffold_10006890 Rosmarinic Acid CPR low borderline
TRsanscaffold_20079450 Rosmarinic Acid CPR medium pass
TRsanscaffold_70189570 Rosmarinic Acid CPR medium pass
TRsanscaffold_80206390 Rosmarinic Acid CPR low borderline
TRsanscaffold_10009450 Rosmarinic Acid HPPR medium pass
TRsanscaffold_20103010 Rosmarinic Acid HPPR medium pass
TRsanscaffold_20103030 Rosmarinic Acid HPPR medium pass
TRsanscaffold_30117590 Rosmarinic Acid HPPR low borderline
TRsanscaffold_320118570 Rosmarinic Acid HPPR low borderline
TRsanscaffold_110046900 Rosmarinic Acid PAL high pass
TRsanscaffold_20099380 Rosmarinic Acid PAL high pass
TRsanscaffold_40127000 Rosmarinic Acid PAL high pass
TRsanscaffold_40127020 Rosmarinic Acid PAL high pass
TRsanscaffold_40127030 Rosmarinic Acid PAL high pass
TRsanscaffold_50158760 Rosmarinic Acid PAL high pass
TRsanscaffold_90221230 Rosmarinic Acid PAL low borderline
TRsanscaffold_100019680 Rosmarinic Acid RAS low borderline
TRsanscaffold_100020060 Rosmarinic Acid RAS low borderline
TRsanscaffold_100021130 Rosmarinic Acid RAS medium pass
TRsanscaffold_100024540 Rosmarinic Acid RAS medium pass
TRsanscaffold_100039320 Rosmarinic Acid RAS low borderline
TRsanscaffold_110041510 Rosmarinic Acid RAS low borderline
TRsanscaffold_110043450 Rosmarinic Acid RAS low borderline
TRsanscaffold_120050930 Rosmarinic Acid RAS low borderline