PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

1885
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 16OMT
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Gene Pathway Family Confidence Status
Aalbaalba5_s000000110000020.1 Alkaloid 16OMT medium borderline
Aalbaalba5_s000016830014980.1 Alkaloid 16OMT medium borderline
Aalbaalba5_s000248380144120.1 Alkaloid 16OMT low borderline
Aalbaalba5_s000385260203140.1 Alkaloid 16OMT medium borderline
Aalbaalba5_s000759250336530.1 Alkaloid 16OMT low borderline
Aalbaalba5_s001152540441760.1 Alkaloid 16OMT medium borderline
Aalbaalba5_s001306680475710.1 Alkaloid 16OMT medium borderline
Aalbaalba5_s001376690490690.1 Alkaloid 16OMT medium borderline
Aalbaalba5_s001524840520420.1 Alkaloid 16OMT medium borderline
Aalbaalba5_s001634180541430.1 Alkaloid 16OMT medium borderline
Aalbaalba5_s002107350616510.1 Alkaloid 16OMT medium borderline
Aalbaalba5_s002925680709030.1 Alkaloid 16OMT medium borderline
Aalbaalba5_s003006940715840.1 Alkaloid 16OMT medium borderline
Aalbaalba5_s003006940715850.1 Alkaloid 16OMT medium borderline
Aalbaalba5_s003581210757840.1 Alkaloid 16OMT medium borderline
Aalbaalba5_s003655190762420.1 Alkaloid 16OMT medium borderline
Aalbaalba5_s005112930833870.1 Alkaloid 16OMT medium borderline
Aalbaalba5_s005270070838920.1 Alkaloid 16OMT medium borderline
Aalbaalba5_s005371430842420.1 Alkaloid 16OMT medium borderline
Aalbaalba5_s005411730843760.1 Alkaloid 16OMT medium borderline
Aalbaalba5_s005411730843760.2 Alkaloid 16OMT medium borderline
Aalbaalba5_s005788830854590.1 Alkaloid 16OMT medium borderline