PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

1885
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Gene Pathway Family Confidence Status
Aalbaalba5_s000017990016050.1 Steroid CYP90D1 low borderline
Aalbaalba5_s000036920030440.1 Steroid CYP90D1 low borderline
Aalbaalba5_s000040240032690.1 Steroid CYP90D1 low borderline
Aalbaalba5_s000143670093100.1 Steroid CYP90D1 low borderline
Aalbaalba5_s000219700130860.1 Steroid CYP90D1 medium borderline
Aalbaalba5_s000219700130860.2 Steroid CYP90D1 medium borderline
Aalbaalba5_s000316380173640.1 Steroid CYP90D1 low borderline
Aalbaalba5_s000382280201780.1 Steroid CYP90D1 medium borderline
Aalbaalba5_s000382280201780.2 Steroid CYP90D1 medium borderline
Aalbaalba5_s000577910278500.1 Steroid CYP90D1 medium borderline
Aalbaalba5_s000739190330410.1 Steroid CYP90D1 low borderline
Aalbaalba5_s000889360374100.1 Steroid CYP90D1 low borderline
Aalbaalba5_s001561260527520.1 Steroid CYP90D1 low borderline
Aalbaalba5_s001609980536490.2 Steroid CYP90D1 medium borderline
Aalbaalba5_s001688610551180.1 Steroid CYP90D1 low borderline
Aalbaalba5_s001763320563470.1 Steroid CYP90D1 low borderline
Aalbaalba5_s001792570568340.1 Steroid CYP90D1 medium borderline
Aalbaalba5_s002042370607100.1 Steroid CYP90D1 low borderline
Aalbaalba5_s002574840674300.1 Steroid CYP90D1 medium borderline
Aalbaalba5_s003227580733640.1 Steroid CYP90D1 low borderline
Aalbaalba5_s003974380781170.1 Steroid CYP90D1 low borderline
Aalbaalba5_s004486880807520.1 Steroid CYP90D1 low borderline
Aalbaalba5_s004593650812430.1 Steroid CYP90D1 medium borderline
Aalbaalba5_s005975290858880.1 Steroid CYP90D1 medium borderline
Aalbaalba5_s006251580865360.1 Steroid CYP90D1 low borderline
Aalbaalba5_s007967350893260.1 Steroid CYP90D1 low borderline
Aalbaalba5_s008693450901350.1 Steroid CYP90D1 medium borderline