PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

1885
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CCR
Reset
Gene Pathway Family Confidence Status
Aalbaalba5_s000234350137550.1 Phenylpropanoid CCR medium borderline
Aalbaalba5_s000249600144630.1 Phenylpropanoid CCR medium pass
Aalbaalba5_s000296770164700.1 Phenylpropanoid CCR low borderline
Aalbaalba5_s000462720235800.1 Phenylpropanoid CCR medium borderline
Aalbaalba5_s000523580259240.1 Phenylpropanoid CCR medium pass
Aalbaalba5_s000588470282220.1 Phenylpropanoid CCR medium pass
Aalbaalba5_s000606740288400.1 Phenylpropanoid CCR medium borderline
Aalbaalba5_s000628530295740.1 Phenylpropanoid CCR medium pass
Aalbaalba5_s000631960296900.1 Phenylpropanoid CCR low borderline
Aalbaalba5_s000738300330160.1 Phenylpropanoid CCR low borderline
Aalbaalba5_s000988550400740.1 Phenylpropanoid CCR medium borderline
Aalbaalba5_s001031790411620.1 Phenylpropanoid CCR medium pass
Aalbaalba5_s001247020463040.1 Phenylpropanoid CCR medium pass
Aalbaalba5_s001286460471630.1 Phenylpropanoid CCR medium pass
Aalbaalba5_s001420940499810.1 Phenylpropanoid CCR low borderline
Aalbaalba5_s001540470523480.1 Phenylpropanoid CCR medium pass
Aalbaalba5_s001571930529600.1 Phenylpropanoid CCR medium borderline
Aalbaalba5_s001578010530480.1 Phenylpropanoid CCR medium pass
Aalbaalba5_s001580230531020.1 Phenylpropanoid CCR medium pass
Aalbaalba5_s001877550582430.1 Phenylpropanoid CCR medium pass
Aalbaalba5_s001877550582430.2 Phenylpropanoid CCR medium pass
Aalbaalba5_s002430850657930.1 Phenylpropanoid CCR medium pass
Aalbaalba5_s002534600669640.1 Phenylpropanoid CCR medium borderline
Aalbaalba5_s002635190680620.1 Phenylpropanoid CCR medium borderline
Aalbaalba5_s003390580745730.1 Phenylpropanoid CCR medium borderline
Aalbaalba5_s003390580745730.2 Phenylpropanoid CCR medium borderline
Aalbaalba5_s003441930749190.1 Phenylpropanoid CCR low borderline
Aalbaalba5_s004301800799170.1 Phenylpropanoid CCR medium pass
Aalbaalba5_s008642740900780.1 Phenylpropanoid CCR low borderline
Aalbaalba5_s012191300924670.1 Phenylpropanoid CCR low borderline