PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

1885
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FNS
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Gene Pathway Family Confidence Status
Aalbaalba5_s000017990016050.1 Flavonoid FNS medium borderline
Aalbaalba5_s000147920095440.1 Flavonoid FNS medium borderline
Aalbaalba5_s000190170117410.1 Flavonoid FNS medium borderline
Aalbaalba5_s000251570145480.1 Flavonoid FNS medium borderline
Aalbaalba5_s000263370150910.1 Flavonoid FNS medium pass
Aalbaalba5_s000322210175950.1 Flavonoid FNS medium borderline
Aalbaalba5_s000327480177970.1 Flavonoid FNS medium borderline
Aalbaalba5_s000465870237190.1 Flavonoid FNS medium borderline
Aalbaalba5_s000685940314040.1 Flavonoid FNS medium borderline
Aalbaalba5_s000810390351860.1 Flavonoid FNS medium borderline
Aalbaalba5_s000814800353240.1 Flavonoid FNS medium borderline
Aalbaalba5_s000862310366310.1 Flavonoid FNS low borderline
Aalbaalba5_s000955410391760.1 Flavonoid FNS medium borderline
Aalbaalba5_s000974630396860.1 Flavonoid FNS medium borderline
Aalbaalba5_s000994400402170.1 Flavonoid FNS medium borderline
Aalbaalba5_s001019560408580.1 Flavonoid FNS low borderline
Aalbaalba5_s001019560408580.2 Flavonoid FNS low borderline
Aalbaalba5_s001019560408580.3 Flavonoid FNS low borderline
Aalbaalba5_s001215380456000.1 Flavonoid FNS medium borderline
Aalbaalba5_s002021140604240.1 Flavonoid FNS medium borderline
Aalbaalba5_s002564020673100.1 Flavonoid FNS medium borderline
Aalbaalba5_s003471990751160.1 Flavonoid FNS medium borderline
Aalbaalba5_s003672500763510.1 Flavonoid FNS medium borderline
Aalbaalba5_s004075960787060.1 Flavonoid FNS medium borderline
Aalbaalba5_s004617640813370.1 Flavonoid FNS low borderline
Aalbaalba5_s004770750819630.1 Flavonoid FNS medium borderline
Aalbaalba5_s005019870830280.1 Flavonoid FNS medium pass
Aalbaalba5_s005714340852680.1 Flavonoid FNS medium borderline
Aalbaalba5_s006332970867110.1 Flavonoid FNS medium borderline
Aalbaalba5_s006905770877680.1 Flavonoid FNS medium borderline
Aalbaalba5_s007967350893260.1 Flavonoid FNS medium borderline