PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

1885
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
Reset
Gene Pathway Family Confidence Status
Aalbaalba5_s000040240032690.1 Alkaloid IO medium borderline
Aalbaalba5_s000143670093100.1 Alkaloid IO low borderline
Aalbaalba5_s000219700130860.1 Alkaloid IO low borderline
Aalbaalba5_s000303390167640.1 Alkaloid IO low borderline
Aalbaalba5_s000371640197060.1 Alkaloid IO low borderline
Aalbaalba5_s000470610239080.1 Alkaloid IO medium borderline
Aalbaalba5_s000475290240990.1 Alkaloid IO medium borderline
Aalbaalba5_s000664850307320.1 Alkaloid IO low borderline
Aalbaalba5_s000828480357070.1 Alkaloid IO low borderline
Aalbaalba5_s000979710398340.1 Alkaloid IO medium pass
Aalbaalba5_s000992670401710.1 Alkaloid IO medium borderline
Aalbaalba5_s001086470425880.1 Alkaloid IO medium borderline
Aalbaalba5_s001286920471740.1 Alkaloid IO low borderline
Aalbaalba5_s001453500506020.1 Alkaloid IO low borderline
Aalbaalba5_s001522890520100.1 Alkaloid IO medium borderline
Aalbaalba5_s001610800536710.1 Alkaloid IO medium pass
Aalbaalba5_s001688610551180.1 Alkaloid IO low borderline
Aalbaalba5_s001771810564950.1 Alkaloid IO medium borderline
Aalbaalba5_s001824880573460.1 Alkaloid IO medium borderline
Aalbaalba5_s002245230634930.1 Alkaloid IO medium borderline
Aalbaalba5_s002381900651950.1 Alkaloid IO medium borderline
Aalbaalba5_s002509980666860.1 Alkaloid IO medium borderline
Aalbaalba5_s002541080670410.1 Alkaloid IO low borderline
Aalbaalba5_s003009800716090.1 Alkaloid IO low borderline
Aalbaalba5_s003063930720700.1 Alkaloid IO medium borderline
Aalbaalba5_s003156820728350.1 Alkaloid IO medium borderline
Aalbaalba5_s003227580733640.1 Alkaloid IO medium borderline
Aalbaalba5_s003467240750830.1 Alkaloid IO medium borderline
Aalbaalba5_s003750050768540.1 Alkaloid IO medium borderline
Aalbaalba5_s003826350773210.1 Alkaloid IO low borderline
Aalbaalba5_s004593650812430.2 Alkaloid IO low borderline
Aalbaalba5_s004931430826430.1 Alkaloid IO medium borderline
Aalbaalba5_s005714340852680.1 Alkaloid IO medium pass
Aalbaalba5_s005827640855460.1 Alkaloid IO medium borderline
Aalbaalba5_s006214070864530.1 Alkaloid IO low borderline
Aalbaalba5_s007765770890710.2 Alkaloid IO medium borderline
Aalbaalba5_s007967350893260.1 Alkaloid IO low borderline
Aalbaalba5_s008324030897240.1 Alkaloid IO medium borderline
Aalbaalba5_s012503700925880.1 Alkaloid IO low borderline
Aalbaalba5_s017550500938920.1 Alkaloid IO medium borderline