PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

1885
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP80B1
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Gene Pathway Family Confidence Status
Aalbaalba5_s000007100006640.1 Alkaloid CYP80B1 medium pass
Aalbaalba5_s000017990016050.1 Alkaloid CYP80B1 medium borderline
Aalbaalba5_s000110130075480.1 Alkaloid CYP80B1 medium pass
Aalbaalba5_s000323390176400.1 Alkaloid CYP80B1 medium borderline
Aalbaalba5_s000491130247340.1 Alkaloid CYP80B1 medium borderline
Aalbaalba5_s000629440296000.1 Alkaloid CYP80B1 low borderline
Aalbaalba5_s000810390351860.1 Alkaloid CYP80B1 low borderline
Aalbaalba5_s000925190383610.1 Alkaloid CYP80B1 low borderline
Aalbaalba5_s001083790425190.1 Alkaloid CYP80B1 medium borderline
Aalbaalba5_s001225220458110.1 Alkaloid CYP80B1 medium borderline
Aalbaalba5_s001729000558160.1 Alkaloid CYP80B1 medium borderline
Aalbaalba5_s001729000558160.2 Alkaloid CYP80B1 medium borderline
Aalbaalba5_s002022770604470.1 Alkaloid CYP80B1 medium borderline
Aalbaalba5_s002322980644660.1 Alkaloid CYP80B1 medium borderline
Aalbaalba5_s002564020673100.1 Alkaloid CYP80B1 low borderline
Aalbaalba5_s002773470694490.1 Alkaloid CYP80B1 medium borderline
Aalbaalba5_s003051910719810.1 Alkaloid CYP80B1 medium borderline
Aalbaalba5_s003672500763510.1 Alkaloid CYP80B1 medium borderline
Aalbaalba5_s003900800777140.1 Alkaloid CYP80B1 low borderline
Aalbaalba5_s004931470826440.1 Alkaloid CYP80B1 medium borderline
Aalbaalba5_s006332970867110.1 Alkaloid CYP80B1 medium borderline