PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

1885
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HMGR
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Gene Pathway Family Confidence Status
Aalbaalba5_s000005720005420.1 Terpenoid HMGR medium pass
Aalbaalba5_s000017770015800.1 Terpenoid HMGR medium pass
Aalbaalba5_s000036290029920.1 Terpenoid HMGR medium pass
Aalbaalba5_s000036290029930.1 Terpenoid HMGR medium pass
Aalbaalba5_s000124540083190.1 Terpenoid HMGR medium pass
Aalbaalba5_s000148450095820.1 Terpenoid HMGR medium pass
Aalbaalba5_s000148450095820.2 Terpenoid HMGR medium pass
Aalbaalba5_s000148450095820.3 Terpenoid HMGR medium pass
Aalbaalba5_s000153190098120.1 Terpenoid HMGR medium pass
Aalbaalba5_s000300630166530.1 Terpenoid HMGR medium pass
Aalbaalba5_s000445340228740.1 Terpenoid HMGR medium pass
Aalbaalba5_s000492330247760.1 Terpenoid HMGR medium pass
Aalbaalba5_s000577940278520.1 Terpenoid HMGR low borderline
Aalbaalba5_s000577940278530.1 Terpenoid HMGR medium pass
Aalbaalba5_s000706280320520.1 Terpenoid HMGR medium pass
Aalbaalba5_s000709150321250.1 Terpenoid HMGR medium pass
Aalbaalba5_s000709150321260.1 Terpenoid HMGR medium pass
Aalbaalba5_s001121670434170.1 Terpenoid HMGR low borderline
Aalbaalba5_s001241170461540.1 Terpenoid HMGR medium pass
Aalbaalba5_s001289500472180.1 Terpenoid HMGR medium pass
Aalbaalba5_s001757050562530.1 Terpenoid HMGR medium pass
Aalbaalba5_s001875350582040.1 Terpenoid HMGR low borderline
Aalbaalba5_s002039580606650.1 Terpenoid HMGR medium pass
Aalbaalba5_s002078240612450.1 Terpenoid HMGR medium pass
Aalbaalba5_s002493940664980.1 Terpenoid HMGR medium pass
Aalbaalba5_s002661230683370.1 Terpenoid HMGR medium pass
Aalbaalba5_s003222180733260.1 Terpenoid HMGR medium pass
Aalbaalba5_s003625180760470.1 Terpenoid HMGR medium pass
Aalbaalba5_s003812180772460.1 Terpenoid HMGR medium pass
Aalbaalba5_s003812180772460.2 Terpenoid HMGR medium pass
Aalbaalba5_s004180680792960.1 Terpenoid HMGR medium pass
Aalbaalba5_s004413460804220.1 Terpenoid HMGR medium pass
Aalbaalba5_s004805030821020.1 Terpenoid HMGR medium pass
Aalbaalba5_s005095190833160.1 Terpenoid HMGR medium pass
Aalbaalba5_s005130070834450.1 Terpenoid HMGR medium pass
Aalbaalba5_s005243220838100.1 Terpenoid HMGR medium pass
Aalbaalba5_s005304270840130.1 Terpenoid HMGR medium pass
Aalbaalba5_s005429530844290.1 Terpenoid HMGR low borderline
Aalbaalba5_s005510500847070.1 Terpenoid HMGR medium pass
Aalbaalba5_s006448720869390.1 Terpenoid HMGR medium pass
Aalbaalba5_s006448720869390.2 Terpenoid HMGR medium pass
Aalbaalba5_s007139990881860.1 Terpenoid HMGR medium pass
Aalbaalba5_s009454850907920.1 Terpenoid HMGR medium pass
Aalbaalba5_s013247110928360.1 Terpenoid HMGR medium pass
Aalbaalba5_s016666370936890.1 Terpenoid HMGR medium pass