PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

1885
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAMT
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Gene Pathway Family Confidence Status
Aalbaalba5_s000099830070200.1 Alkaloid LAMT medium borderline
Aalbaalba5_s000155230099430.1 Alkaloid LAMT low borderline
Aalbaalba5_s000179760111780.1 Alkaloid LAMT medium borderline
Aalbaalba5_s000300300166320.1 Alkaloid LAMT medium borderline
Aalbaalba5_s000315960173450.1 Alkaloid LAMT medium borderline
Aalbaalba5_s000351710188660.1 Alkaloid LAMT medium borderline
Aalbaalba5_s000580070279400.1 Alkaloid LAMT medium borderline
Aalbaalba5_s000620190292590.1 Alkaloid LAMT low borderline
Aalbaalba5_s000735530329150.1 Alkaloid LAMT medium borderline
Aalbaalba5_s000917370381780.1 Alkaloid LAMT medium borderline
Aalbaalba5_s001011210406440.1 Alkaloid LAMT medium borderline
Aalbaalba5_s001014440407350.1 Alkaloid LAMT medium borderline
Aalbaalba5_s001160000443490.1 Alkaloid LAMT low borderline
Aalbaalba5_s001163970444220.1 Alkaloid LAMT medium borderline
Aalbaalba5_s001312250476940.1 Alkaloid LAMT low borderline
Aalbaalba5_s001426890500790.1 Alkaloid LAMT medium borderline
Aalbaalba5_s001511790517860.1 Alkaloid LAMT medium borderline
Aalbaalba5_s001515360518680.1 Alkaloid LAMT low borderline
Aalbaalba5_s001580610531070.1 Alkaloid LAMT medium borderline
Aalbaalba5_s001654340544980.1 Alkaloid LAMT medium borderline
Aalbaalba5_s001680870549690.1 Alkaloid LAMT medium borderline
Aalbaalba5_s001721630557130.1 Alkaloid LAMT medium borderline
Aalbaalba5_s001822600573150.1 Alkaloid LAMT medium borderline
Aalbaalba5_s001831910574700.1 Alkaloid LAMT medium borderline
Aalbaalba5_s001831910574700.2 Alkaloid LAMT medium borderline
Aalbaalba5_s002097500615180.1 Alkaloid LAMT medium borderline
Aalbaalba5_s002182100626950.1 Alkaloid LAMT medium borderline
Aalbaalba5_s002731260690630.1 Alkaloid LAMT medium borderline
Aalbaalba5_s002939370710100.1 Alkaloid LAMT medium borderline
Aalbaalba5_s003487970752230.1 Alkaloid LAMT medium borderline
Aalbaalba5_s003799950771770.1 Alkaloid LAMT medium borderline
Aalbaalba5_s005124900834260.1 Alkaloid LAMT low borderline
Aalbaalba5_s005209150836960.1 Alkaloid LAMT medium borderline