PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

1885
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
Reset
Gene Pathway Family Confidence Status
Aalbaalba5_s000008750008230.1 Alkaloid GS low borderline
Aalbaalba5_s000015300013730.1 Alkaloid GS low borderline
Aalbaalba5_s000026040022230.1 Alkaloid GS low borderline
Aalbaalba5_s000057840044180.1 Alkaloid GS low borderline
Aalbaalba5_s000057840044180.2 Alkaloid GS low borderline
Aalbaalba5_s000065430048810.1 Alkaloid GS low borderline
Aalbaalba5_s000116510078880.1 Alkaloid GS low borderline
Aalbaalba5_s000138800090380.1 Alkaloid GS low borderline
Aalbaalba5_s000301890167220.1 Alkaloid GS low borderline
Aalbaalba5_s000317760174230.1 Alkaloid GS medium pass
Aalbaalba5_s000397650208240.1 Alkaloid GS low borderline
Aalbaalba5_s000460570234960.1 Alkaloid GS low borderline
Aalbaalba5_s000666850307920.1 Alkaloid GS low borderline
Aalbaalba5_s000696850317550.1 Alkaloid GS low borderline
Aalbaalba5_s000741400330970.1 Alkaloid GS low borderline
Aalbaalba5_s000842050360640.1 Alkaloid GS low borderline
Aalbaalba5_s000895030375510.1 Alkaloid GS low borderline
Aalbaalba5_s001239830461260.1 Alkaloid GS low borderline
Aalbaalba5_s001428740501230.1 Alkaloid GS low borderline
Aalbaalba5_s001667150547440.1 Alkaloid GS low borderline
Aalbaalba5_s001722380557250.1 Alkaloid GS low borderline
Aalbaalba5_s001775250565470.1 Alkaloid GS low borderline
Aalbaalba5_s001806850570780.1 Alkaloid GS low borderline
Aalbaalba5_s001813250571740.1 Alkaloid GS low borderline
Aalbaalba5_s001900960585990.1 Alkaloid GS low borderline
Aalbaalba5_s001945950593060.1 Alkaloid GS low borderline
Aalbaalba5_s001962010595720.1 Alkaloid GS low borderline
Aalbaalba5_s002086140613590.1 Alkaloid GS low borderline
Aalbaalba5_s002093100614580.1 Alkaloid GS low borderline
Aalbaalba5_s002268460637890.1 Alkaloid GS low borderline
Aalbaalba5_s002398240653910.1 Alkaloid GS low borderline
Aalbaalba5_s002430430657860.1 Alkaloid GS low borderline
Aalbaalba5_s002540820670370.1 Alkaloid GS medium pass
Aalbaalba5_s002650300682200.1 Alkaloid GS low borderline
Aalbaalba5_s002775650694760.1 Alkaloid GS low borderline
Aalbaalba5_s002947630710770.1 Alkaloid GS low borderline
Aalbaalba5_s002947630710770.2 Alkaloid GS low borderline
Aalbaalba5_s003230670733920.1 Alkaloid GS low borderline
Aalbaalba5_s003415490747490.1 Alkaloid GS low borderline
Aalbaalba5_s003415490747490.2 Alkaloid GS low borderline
Aalbaalba5_s003432830748660.1 Alkaloid GS medium pass
Aalbaalba5_s003537770755190.1 Alkaloid GS low borderline
Aalbaalba5_s003763210769310.1 Alkaloid GS low borderline
Aalbaalba5_s003821210772970.1 Alkaloid GS low borderline
Aalbaalba5_s004156720791640.1 Alkaloid GS low borderline
Aalbaalba5_s005161530835460.1 Alkaloid GS low borderline
Aalbaalba5_s005459130845310.1 Alkaloid GS low borderline
Aalbaalba5_s007280590884200.1 Alkaloid GS low borderline
Aalbaalba5_s007601860888780.1 Alkaloid GS low borderline
Aalbaalba5_s010874920918110.1 Alkaloid GS low borderline