PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

1885
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CHS
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Gene Pathway Family Confidence Status
Aalbaalba5_s000053580041300.1 Flavonoid CHS medium pass
Aalbaalba5_s000077770056830.1 Flavonoid CHS low borderline
Aalbaalba5_s000125880083980.1 Flavonoid CHS low borderline
Aalbaalba5_s000125880083990.1 Flavonoid CHS medium pass
Aalbaalba5_s000164550103910.1 Flavonoid CHS medium pass
Aalbaalba5_s000166900105200.1 Flavonoid CHS medium pass
Aalbaalba5_s000200900122390.1 Flavonoid CHS medium pass
Aalbaalba5_s000502220251220.1 Flavonoid CHS medium pass
Aalbaalba5_s000502220251230.1 Flavonoid CHS medium pass
Aalbaalba5_s000627940295520.1 Flavonoid CHS medium pass
Aalbaalba5_s000653920304100.1 Flavonoid CHS medium pass
Aalbaalba5_s000808710351420.1 Flavonoid CHS medium pass
Aalbaalba5_s000923510383240.1 Flavonoid CHS medium pass
Aalbaalba5_s001272510468580.1 Flavonoid CHS medium pass
Aalbaalba5_s001447380504910.1 Flavonoid CHS medium pass
Aalbaalba5_s001503850516420.1 Flavonoid CHS medium pass
Aalbaalba5_s001570850529420.1 Flavonoid CHS medium pass
Aalbaalba5_s001635410541670.1 Flavonoid CHS medium pass
Aalbaalba5_s001635410541680.1 Flavonoid CHS low borderline
Aalbaalba5_s001781620566420.1 Flavonoid CHS medium pass
Aalbaalba5_s001849200577470.1 Flavonoid CHS medium pass
Aalbaalba5_s001869280581060.1 Flavonoid CHS low borderline
Aalbaalba5_s001907660587070.1 Flavonoid CHS medium pass
Aalbaalba5_s001979630598280.1 Flavonoid CHS medium pass
Aalbaalba5_s002038240606510.1 Flavonoid CHS medium pass
Aalbaalba5_s002064240610280.1 Flavonoid CHS medium pass
Aalbaalba5_s002210680630750.1 Flavonoid CHS medium pass
Aalbaalba5_s003108700724350.1 Flavonoid CHS medium pass
Aalbaalba5_s003737800767740.1 Flavonoid CHS medium pass
Aalbaalba5_s004013470783550.1 Flavonoid CHS medium pass
Aalbaalba5_s004611570813040.1 Flavonoid CHS medium pass
Aalbaalba5_s004784380820060.1 Flavonoid CHS medium pass
Aalbaalba5_s004950900827420.1 Flavonoid CHS medium pass
Aalbaalba5_s005380970842760.1 Flavonoid CHS medium pass
Aalbaalba5_s006639550873190.1 Flavonoid CHS low borderline
Aalbaalba5_s007361800885420.1 Flavonoid CHS low borderline
Aalbaalba5_s007437320886410.1 Flavonoid CHS low borderline