PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

1885
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
Aalbaalba5_s000187660116060.1 Phenylpropanoid LAC low borderline LAC__00002__sp_O81081_LAC2_ARATH
Aalbaalba5_s000187660116070.1 Phenylpropanoid LAC low borderline LAC__00002__sp_O81081_LAC2_ARATH
Aalbaalba5_s000288750161600.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Aalbaalba5_s000345610185900.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Aalbaalba5_s000413390214880.1 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Aalbaalba5_s000413390214880.2 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Aalbaalba5_s000679740312190.1 Phenylpropanoid LAC low borderline LAC__00002__sp_O81081_LAC2_ARATH
Aalbaalba5_s000846570361920.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Aalbaalba5_s000974800396920.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Aalbaalba5_s001609450536420.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Aalbaalba5_s001758810562830.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Aalbaalba5_s001784480566920.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Aalbaalba5_s001795450568910.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Aalbaalba5_s001839020576020.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Aalbaalba5_s001953840594500.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Aalbaalba5_s001953840594500.2 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Aalbaalba5_s002073450611600.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Aalbaalba5_s002334420646090.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Aalbaalba5_s002351970648400.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Aalbaalba5_s002635980680690.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Aalbaalba5_s003170370729430.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Aalbaalba5_s003999330782590.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Aalbaalba5_s004962190827850.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Aalbaalba5_s005115590833980.1 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Aalbaalba5_s005269960838910.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Aalbaalba5_s005579030848970.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Aalbaalba5_s008451010898630.1 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Aalbaalba5_s010954970918630.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH