PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

1885
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
Aalbaalba5_s000058090044350.1 Alkaloid T16H medium borderline
Aalbaalba5_s000067440050170.1 Alkaloid T16H low borderline
Aalbaalba5_s000166820105190.1 Alkaloid T16H medium borderline
Aalbaalba5_s000223900132690.1 Alkaloid T16H medium borderline
Aalbaalba5_s000229610135440.1 Alkaloid T16H medium borderline
Aalbaalba5_s000312360171720.1 Alkaloid T16H low borderline
Aalbaalba5_s000327480177970.1 Alkaloid T16H medium borderline
Aalbaalba5_s000681920312790.1 Alkaloid T16H medium borderline
Aalbaalba5_s000760370336860.1 Alkaloid T16H low borderline
Aalbaalba5_s000917160381710.1 Alkaloid T16H medium borderline
Aalbaalba5_s000955410391760.1 Alkaloid T16H medium borderline
Aalbaalba5_s001037560412910.1 Alkaloid T16H medium borderline
Aalbaalba5_s001043550414320.1 Alkaloid T16H medium borderline
Aalbaalba5_s001063210419630.1 Alkaloid T16H medium borderline
Aalbaalba5_s001292880472800.1 Alkaloid T16H medium borderline
Aalbaalba5_s001295160473280.1 Alkaloid T16H medium borderline
Aalbaalba5_s001338380482450.1 Alkaloid T16H medium borderline
Aalbaalba5_s001343110483510.1 Alkaloid T16H medium borderline
Aalbaalba5_s001556620526490.1 Alkaloid T16H medium borderline
Aalbaalba5_s001675730548840.1 Alkaloid T16H low borderline
Aalbaalba5_s001682160549920.1 Alkaloid T16H medium borderline
Aalbaalba5_s001713960555830.1 Alkaloid T16H medium borderline
Aalbaalba5_s001869410581070.1 Alkaloid T16H medium borderline
Aalbaalba5_s002089750614150.1 Alkaloid T16H low borderline
Aalbaalba5_s002237530633890.1 Alkaloid T16H medium borderline
Aalbaalba5_s002607460677910.1 Alkaloid T16H medium pass
Aalbaalba5_s003160100728620.1 Alkaloid T16H medium borderline
Aalbaalba5_s004270170797460.1 Alkaloid T16H medium borderline
Aalbaalba5_s004314320799690.1 Alkaloid T16H low borderline
Aalbaalba5_s004446790805770.1 Alkaloid T16H medium borderline
Aalbaalba5_s004617640813370.1 Alkaloid T16H low borderline
Aalbaalba5_s004987430828970.1 Alkaloid T16H medium borderline
Aalbaalba5_s005727340853000.1 Alkaloid T16H medium borderline
Aalbaalba5_s005975290858880.1 Alkaloid T16H low borderline
Aalbaalba5_s006345090867360.1 Alkaloid T16H medium borderline
Aalbaalba5_s008270780896720.1 Alkaloid T16H low borderline
Aalbaalba5_s008324030897240.2 Alkaloid T16H medium borderline
Aalbaalba5_s010887230918190.1 Alkaloid T16H medium borderline
Aalbaalba5_s013842990930170.1 Alkaloid T16H medium borderline