PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

2579
Candidate Protein Records
1885
Pathway-Level Records
4430
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Aalbaalba5_s002515370667360.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Aalbaalba5_s002553570672000.1 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Aalbaalba5_s002824410699500.1 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Aalbaalba5_s002826550699770.1 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Aalbaalba5_s003113330724620.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Aalbaalba5_s003194790731170.1 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Aalbaalba5_s003254210735740.1 Rosmarinic Acid 4CL low borderline 4CL__00001__sp_I3PB36_CNL_PETHY
Aalbaalba5_s003314240740370.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Aalbaalba5_s003718010766610.1 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Aalbaalba5_s003814060772560.1 Rosmarinic Acid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Aalbaalba5_s003958990780150.1 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Aalbaalba5_s004032460784540.1 Rosmarinic Acid 4CL low borderline 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ
Aalbaalba5_s004301480799140.1 Rosmarinic Acid 4CL low borderline 4CL__00009__sp_Q67W82_4CL4_ORYSJ
Aalbaalba5_s004842190822600.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Aalbaalba5_s004922000825930.1 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Aalbaalba5_s004990370829070.1 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Aalbaalba5_s005818880855200.1 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Aalbaalba5_s005836810855670.1 Rosmarinic Acid 4CL low borderline 4CL__00013__sp_Q84P23_4CLL9_ARATH
Aalbaalba5_s005867180856480.1 Rosmarinic Acid 4CL low borderline 4CL__00012__sp_Q84P21_4CLL5_ARATH
Aalbaalba5_s006042300860580.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Aalbaalba5_s006167280863660.1 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Aalbaalba5_s007012270879780.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Aalbaalba5_s007082590880960.1 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Aalbaalba5_s008404770898160.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Aalbaalba5_s014404990932060.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY