Abies alba (abies_alba)
Imported from atlas release summary for Abies alba.
1885
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1885
Candidate Genes
4CL
7.34%
BAHD
6.41%
C4H
5.35%
POD
5.12%
C3'H/CYP98A
3.95%
CYP76
3.7%
UGT
3.59%
F3H
3.05%
Other Families
61.49%
More Families (95)
NMT
131
2.96%
7DLGT
101
2.28%
IFS
101
2.28%
DWF4/CYP90B1
90
2.03%
IFR
89
2.01%
H6H
87
1.96%
T3O
74
1.67%
F3'H/CYP75B
74
1.67%
COMT
69
1.56%
CODM/T6ODM
68
1.53%
TRI/TRII
66
1.49%
G8O/G8H
66
1.49%
UFGT
64
1.44%
CNMT
63
1.42%
CSE
61
1.38%
STR
59
1.33%
BR6OX2/CYP85A2
58
1.31%
GS
51
1.15%
F3'5'H/CYP75A
51
1.15%
PYKS
48
1.08%
HMGR
45
1.02%
RAS
44
0.99%
SMT1/SMT2/SMT3
44
0.99%
PAL
42
0.95%
HCT
42
0.95%
IO
40
0.9%
T16H
39
0.88%
CHS
37
0.84%
LAMT
33
0.74%
FNS
31
0.7%
NCS
30
0.68%
CCR
30
0.68%
ANR
29
0.65%
CAD
29
0.65%
CYP71
29
0.65%
PMT
28
0.63%
LAC
28
0.63%
CYP90D1
27
0.61%
XMT_MXMT_DXMT
26
0.59%
CCoAOMT
26
0.59%
F5H/CYP84A
26
0.59%
CAS
26
0.59%
ANS/LDOX
25
0.56%
MPO
24
0.54%
CYP80F1
23
0.52%
TAT
23
0.52%
16OMT
22
0.5%
CYP80B1
21
0.47%
CYP719
19
0.43%
CPD/CYP90A1
19
0.43%
GGPPS
18
0.41%
BR6OX1/CYP85A1
17
0.38%
SGD
16
0.36%
DFR
15
0.34%
7DLH
14
0.32%
ADC
14
0.32%
SQE
14
0.32%
DET2
13
0.29%
FPPS
13
0.29%
CPR
12
0.27%
SLS
11
0.25%
FLS
11
0.25%
CYP51G1
11
0.25%
ROT3/CYP90C1
11
0.25%
6OMT_4OMT_SOMT
10
0.23%
COR
10
0.23%
HPPR
9
0.2%
TPS
9
0.2%
AACT
9
0.2%
DXS
9
0.2%
BBE
8
0.18%
SQS/FDFT1
8
0.18%
GPPS
8
0.18%
PMK
8
0.18%
MVK
7
0.16%
DWF1
6
0.14%
HDS/IspG
6
0.14%
HMGS
6
0.14%
SMO1/SMO2
5
0.11%
GES
4
0.09%
CHI
4
0.09%
HDR/IspH
4
0.09%
8HGO
3
0.07%
CMK/IspE
3
0.07%
IDI
3
0.07%
MVD
3
0.07%
MCT/IspD
3
0.07%
TDC
2
0.05%
HYD1
2
0.05%
MDS/IspF
2
0.05%
ISY
1
0.02%
TYDC_DDC
1
0.02%
FK
1
0.02%
CPI1
1
0.02%
DXR
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 512 | 18 | BAHD (205) | View species results |
| Phenylpropanoid pathway | 501 | 12 | POD (206) | View species results |
| Alkaloid pathway | 348 | 23 | NMT (65) | View species results |
| Flavonoid pathway | 256 | 15 | 4CL (85) | View species results |
| Rosmarinic acid pathway | 177 | 7 | 4CL (85) | View species results |
| Steroid pathway | 91 | 12 | SMT1/SMT2/SMT3 (30) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1397 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 370 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Aalbaalba5_s000933550385940.1 | Terpenoid | BAHD | low | borderline | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| Aalbaalba5_s000956270391930.1 | Terpenoid | BAHD | low | borderline | BAHD__00023__sp_O22975_LPAAT_ARATH |
| Aalbaalba5_s000974880396950.1 | Terpenoid | BAHD | medium | pass | BAHD__00023__sp_O22975_LPAAT_ARATH |
| Aalbaalba5_s000989720401050.1 | Terpenoid | BAHD | low | borderline | BAHD__00087__sp_Q9M3B1_WSD6_ARATH |
| Aalbaalba5_s001019810408630.1 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| Aalbaalba5_s001054930417330.1 | Terpenoid | BAHD | medium | pass | BAHD__00026__sp_O64811_SCP9_ARATH |
| Aalbaalba5_s001071030421840.1 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| Aalbaalba5_s001073460422440.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Aalbaalba5_s001089760426730.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Aalbaalba5_s001092110427290.1 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| Aalbaalba5_s001106030430520.1 | Terpenoid | BAHD | low | borderline | BAHD__00062__sp_Q93V61_LCAT3_ARATH |
| Aalbaalba5_s001106260430560.1 | Terpenoid | BAHD | medium | pass | BAHD__00097__sp_Q9ZV87_NAPES_ARATH |
| Aalbaalba5_s001167490445050.1 | Terpenoid | BAHD | low | borderline | BAHD__00097__sp_Q9ZV87_NAPES_ARATH |
| Aalbaalba5_s001174670446660.1 | Terpenoid | BAHD | low | borderline | BAHD__00097__sp_Q9ZV87_NAPES_ARATH |
| Aalbaalba5_s001196990451700.1 | Terpenoid | BAHD | low | borderline | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Aalbaalba5_s001261700466240.1 | Terpenoid | BAHD | medium | pass | BAHD__00043__sp_Q52T38_ZDH22_ARATH |
| Aalbaalba5_s001264190466870.1 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| Aalbaalba5_s001264190466870.2 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| Aalbaalba5_s001280740470410.1 | Terpenoid | BAHD | low | borderline | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| Aalbaalba5_s001283040470870.1 | Terpenoid | BAHD | medium | pass | BAHD__00062__sp_Q93V61_LCAT3_ARATH |
| Aalbaalba5_s001290880472450.1 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| Aalbaalba5_s001292690472750.1 | Terpenoid | BAHD | medium | pass | BAHD__00095__sp_Q9SZ58_BRAT1_ARATH |
| Aalbaalba5_s001306020475570.1 | Terpenoid | BAHD | medium | pass | BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH |
| Aalbaalba5_s001314620477530.1 | Terpenoid | BAHD | medium | pass | BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH |
| Aalbaalba5_s001314620477540.1 | Terpenoid | BAHD | medium | pass | BAHD__00079__sp_Q9LIE4_ZDHC8_ARATH |
| Aalbaalba5_s001327480480130.1 | Terpenoid | BAHD | low | borderline | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| Aalbaalba5_s001346440484130.1 | Terpenoid | BAHD | medium | pass | BAHD__00026__sp_O64811_SCP9_ARATH |
| Aalbaalba5_s001360310487130.1 | Terpenoid | BAHD | medium | pass | BAHD__00095__sp_Q9SZ58_BRAT1_ARATH |
| Aalbaalba5_s001385400492540.1 | Terpenoid | BAHD | low | borderline | BAHD__00043__sp_Q52T38_ZDH22_ARATH |
| Aalbaalba5_s001385530492560.1 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| Aalbaalba5_s001434790502310.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Aalbaalba5_s001455390506540.1 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| Aalbaalba5_s001465250508580.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Aalbaalba5_s001475500510690.1 | Terpenoid | BAHD | low | borderline | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| Aalbaalba5_s001498420515520.1 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| Aalbaalba5_s001526650520860.1 | Terpenoid | BAHD | medium | pass | BAHD__00023__sp_O22975_LPAAT_ARATH |
| Aalbaalba5_s001527790521030.1 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| Aalbaalba5_s001531610521870.1 | Terpenoid | BAHD | medium | pass | BAHD__00030__sp_O80816_GLC_ARATH |
| Aalbaalba5_s001560360527300.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Aalbaalba5_s001568220528880.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Aalbaalba5_s001570420529340.1 | Terpenoid | BAHD | low | borderline | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Aalbaalba5_s001580760531090.1 | Terpenoid | BAHD | medium | pass | BAHD__00043__sp_Q52T38_ZDH22_ARATH |
| Aalbaalba5_s001584240531690.1 | Terpenoid | BAHD | low | borderline | BAHD__00087__sp_Q9M3B1_WSD6_ARATH |
| Aalbaalba5_s001584240531690.2 | Terpenoid | BAHD | low | borderline | BAHD__00087__sp_Q9M3B1_WSD6_ARATH |
| Aalbaalba5_s001584240531690.3 | Terpenoid | BAHD | low | borderline | BAHD__00087__sp_Q9M3B1_WSD6_ARATH |
| Aalbaalba5_s001603760535410.1 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| Aalbaalba5_s001652910544710.1 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| Aalbaalba5_s001683210550170.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Aalbaalba5_s001703470554030.1 | Terpenoid | BAHD | low | borderline | BAHD__00023__sp_O22975_LPAAT_ARATH |
| Aalbaalba5_s001729640558310.1 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |