PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

1885
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CODM/T6ODM
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Gene Pathway Family Confidence Status
Aalbaalba5_s001810110571230.1 Alkaloid CODM/T6ODM medium borderline
Aalbaalba5_s001813640571810.1 Alkaloid CODM/T6ODM medium borderline
Aalbaalba5_s001984610598950.1 Alkaloid CODM/T6ODM medium borderline
Aalbaalba5_s002128940619240.1 Alkaloid CODM/T6ODM medium borderline
Aalbaalba5_s002773130694460.1 Alkaloid CODM/T6ODM medium borderline
Aalbaalba5_s002830320700190.1 Alkaloid CODM/T6ODM medium borderline
Aalbaalba5_s003648860762050.1 Alkaloid CODM/T6ODM medium borderline
Aalbaalba5_s003653290762310.1 Alkaloid CODM/T6ODM medium borderline
Aalbaalba5_s003798770771690.1 Alkaloid CODM/T6ODM medium borderline
Aalbaalba5_s003979110781490.1 Alkaloid CODM/T6ODM medium borderline
Aalbaalba5_s004059090786030.1 Alkaloid CODM/T6ODM medium borderline
Aalbaalba5_s005352130841720.1 Alkaloid CODM/T6ODM medium borderline
Aalbaalba5_s006248340865280.1 Alkaloid CODM/T6ODM medium borderline
Aalbaalba5_s006549250871210.1 Alkaloid CODM/T6ODM low borderline
Aalbaalba5_s006628560872880.1 Alkaloid CODM/T6ODM medium borderline
Aalbaalba5_s006660770873520.1 Alkaloid CODM/T6ODM medium borderline
Aalbaalba5_s007605570888820.1 Alkaloid CODM/T6ODM medium borderline
Aalbaalba5_s011707400922480.1 Alkaloid CODM/T6ODM medium borderline