PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

1885
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Aalbaalba5_s000634630297960.1 Flavonoid F3H low borderline
Aalbaalba5_s000635540298330.1 Flavonoid F3H medium borderline
Aalbaalba5_s000665970307660.1 Flavonoid F3H medium borderline
Aalbaalba5_s000693010316200.1 Flavonoid F3H medium borderline
Aalbaalba5_s000782770343350.1 Flavonoid F3H medium borderline
Aalbaalba5_s000795240347290.1 Flavonoid F3H medium borderline
Aalbaalba5_s000808190351250.1 Flavonoid F3H medium borderline
Aalbaalba5_s000820080354770.1 Flavonoid F3H medium borderline
Aalbaalba5_s000924960383600.1 Flavonoid F3H medium borderline
Aalbaalba5_s000951290390590.1 Flavonoid F3H medium borderline
Aalbaalba5_s001021310409060.1 Flavonoid F3H low borderline
Aalbaalba5_s001024800409770.1 Flavonoid F3H medium borderline
Aalbaalba5_s001025950410150.1 Flavonoid F3H medium borderline
Aalbaalba5_s001030970411440.1 Flavonoid F3H medium borderline
Aalbaalba5_s001074370422690.1 Flavonoid F3H low borderline
Aalbaalba5_s001107710430970.1 Flavonoid F3H medium borderline
Aalbaalba5_s001159490443340.1 Flavonoid F3H medium borderline
Aalbaalba5_s001193940450920.1 Flavonoid F3H medium borderline
Aalbaalba5_s001313910477380.1 Flavonoid F3H medium borderline
Aalbaalba5_s001314750477560.1 Flavonoid F3H low borderline
Aalbaalba5_s001322720479110.1 Flavonoid F3H low borderline
Aalbaalba5_s001486850513120.1 Flavonoid F3H medium borderline
Aalbaalba5_s001487960513400.1 Flavonoid F3H medium borderline
Aalbaalba5_s001498840515590.1 Flavonoid F3H medium borderline
Aalbaalba5_s001503620516370.1 Flavonoid F3H low borderline
Aalbaalba5_s001556340526400.1 Flavonoid F3H medium borderline
Aalbaalba5_s001556340526410.1 Flavonoid F3H medium borderline
Aalbaalba5_s001567460528760.1 Flavonoid F3H medium borderline
Aalbaalba5_s001587470532230.1 Flavonoid F3H medium borderline
Aalbaalba5_s001587470532230.2 Flavonoid F3H medium borderline
Aalbaalba5_s001606450535860.1 Flavonoid F3H medium borderline
Aalbaalba5_s001625350539590.1 Flavonoid F3H medium borderline
Aalbaalba5_s001673850548490.1 Flavonoid F3H medium borderline
Aalbaalba5_s001673850548500.1 Flavonoid F3H medium borderline
Aalbaalba5_s001733090558860.1 Flavonoid F3H medium borderline
Aalbaalba5_s001735740559250.1 Flavonoid F3H medium borderline
Aalbaalba5_s001760040562990.1 Flavonoid F3H medium borderline
Aalbaalba5_s001772010565020.1 Flavonoid F3H medium borderline
Aalbaalba5_s001810110571230.1 Flavonoid F3H medium borderline
Aalbaalba5_s001813640571810.1 Flavonoid F3H medium borderline
Aalbaalba5_s001818740572590.1 Flavonoid F3H low borderline
Aalbaalba5_s001912010587750.1 Flavonoid F3H low borderline
Aalbaalba5_s001984610598950.1 Flavonoid F3H medium borderline
Aalbaalba5_s002148060622140.1 Flavonoid F3H low borderline
Aalbaalba5_s002332900645910.1 Flavonoid F3H medium pass
Aalbaalba5_s002343670647280.1 Flavonoid F3H low borderline
Aalbaalba5_s002375470651210.1 Flavonoid F3H medium borderline
Aalbaalba5_s002380030651690.1 Flavonoid F3H medium borderline
Aalbaalba5_s002506750666390.1 Flavonoid F3H medium borderline
Aalbaalba5_s002735790691110.1 Flavonoid F3H medium borderline