PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

1885
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
Aalbaalba5_s001587470532230.2 Alkaloid H6H medium borderline
Aalbaalba5_s001673850548500.1 Alkaloid H6H medium pass
Aalbaalba5_s001735740559250.1 Alkaloid H6H medium borderline
Aalbaalba5_s001818740572590.1 Alkaloid H6H low borderline
Aalbaalba5_s001837910575870.1 Alkaloid H6H low borderline
Aalbaalba5_s002078320612460.1 Alkaloid H6H medium pass
Aalbaalba5_s002148060622140.1 Alkaloid H6H low borderline
Aalbaalba5_s002256200636440.1 Alkaloid H6H low borderline
Aalbaalba5_s002343670647280.1 Alkaloid H6H low borderline
Aalbaalba5_s002375470651210.1 Alkaloid H6H medium borderline
Aalbaalba5_s002506750666390.1 Alkaloid H6H medium borderline
Aalbaalba5_s002572100674040.1 Alkaloid H6H medium borderline
Aalbaalba5_s002606140677730.1 Alkaloid H6H low borderline
Aalbaalba5_s002735790691110.1 Alkaloid H6H medium borderline
Aalbaalba5_s002743000691700.1 Alkaloid H6H medium borderline
Aalbaalba5_s002853440702430.1 Alkaloid H6H medium borderline
Aalbaalba5_s002918490708370.1 Alkaloid H6H low borderline
Aalbaalba5_s002938680710050.1 Alkaloid H6H medium borderline
Aalbaalba5_s003131520726220.1 Alkaloid H6H low borderline
Aalbaalba5_s003331460741530.1 Alkaloid H6H low borderline
Aalbaalba5_s003363050743820.1 Alkaloid H6H medium borderline
Aalbaalba5_s003419200747720.1 Alkaloid H6H medium borderline
Aalbaalba5_s003450160749700.1 Alkaloid H6H low borderline
Aalbaalba5_s003564530756900.1 Alkaloid H6H medium borderline
Aalbaalba5_s003578710757720.1 Alkaloid H6H medium pass
Aalbaalba5_s004074370786990.1 Alkaloid H6H medium borderline
Aalbaalba5_s004519160809170.1 Alkaloid H6H low borderline
Aalbaalba5_s004549830810650.1 Alkaloid H6H low borderline
Aalbaalba5_s004589630812150.1 Alkaloid H6H low borderline
Aalbaalba5_s004667520815410.1 Alkaloid H6H low borderline
Aalbaalba5_s004711690817260.1 Alkaloid H6H low borderline
Aalbaalba5_s005019870830280.1 Alkaloid H6H low borderline
Aalbaalba5_s006559600871430.1 Alkaloid H6H low borderline
Aalbaalba5_s006919600877970.1 Alkaloid H6H low borderline
Aalbaalba5_s013382990928740.1 Alkaloid H6H low borderline
Aalbaalba5_s015419220934650.1 Alkaloid H6H low borderline
Aalbaalba5_s017893590939660.1 Alkaloid H6H low borderline