PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

1885
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
Aalbaalba5_s000009800009360.1 Flavonoid IFR medium pass
Aalbaalba5_s000039930032410.1 Flavonoid IFR low borderline
Aalbaalba5_s000055450042590.1 Flavonoid IFR low borderline
Aalbaalba5_s000166670105100.1 Flavonoid IFR low borderline
Aalbaalba5_s000178450111110.1 Flavonoid IFR medium pass
Aalbaalba5_s000193190118840.1 Flavonoid IFR high pass
Aalbaalba5_s000205040124560.1 Flavonoid IFR medium pass
Aalbaalba5_s000275120155660.1 Flavonoid IFR high pass
Aalbaalba5_s000295070163920.1 Flavonoid IFR high pass
Aalbaalba5_s000296770164700.1 Flavonoid IFR medium pass
Aalbaalba5_s000376730199190.1 Flavonoid IFR medium pass
Aalbaalba5_s000379660200720.1 Flavonoid IFR medium pass
Aalbaalba5_s000458000234020.1 Flavonoid IFR medium pass
Aalbaalba5_s000507990253260.1 Flavonoid IFR high pass
Aalbaalba5_s000517890256920.1 Flavonoid IFR low borderline
Aalbaalba5_s000541550265630.1 Flavonoid IFR low borderline
Aalbaalba5_s000553810270130.1 Flavonoid IFR low borderline
Aalbaalba5_s000553810270140.1 Flavonoid IFR low borderline
Aalbaalba5_s000577940278520.1 Flavonoid IFR low borderline
Aalbaalba5_s000606950288440.1 Flavonoid IFR low borderline
Aalbaalba5_s000625620294560.1 Flavonoid IFR medium pass
Aalbaalba5_s000669520308770.1 Flavonoid IFR high pass
Aalbaalba5_s000706280320530.1 Flavonoid IFR low borderline
Aalbaalba5_s000799460348640.1 Flavonoid IFR high pass
Aalbaalba5_s000812740352450.1 Flavonoid IFR medium pass
Aalbaalba5_s000828650357080.1 Flavonoid IFR high pass
Aalbaalba5_s000901120377300.1 Flavonoid IFR medium pass
Aalbaalba5_s000931260385170.1 Flavonoid IFR high pass
Aalbaalba5_s000931260385180.1 Flavonoid IFR medium pass
Aalbaalba5_s000951260390580.1 Flavonoid IFR low borderline
Aalbaalba5_s000958730392550.1 Flavonoid IFR high pass
Aalbaalba5_s000966930394800.1 Flavonoid IFR high pass
Aalbaalba5_s000984500399650.1 Flavonoid IFR low borderline
Aalbaalba5_s000984500399660.1 Flavonoid IFR low borderline
Aalbaalba5_s001019100408470.1 Flavonoid IFR medium pass
Aalbaalba5_s001027280410480.1 Flavonoid IFR high pass
Aalbaalba5_s001068330421170.1 Flavonoid IFR high pass
Aalbaalba5_s001135120437420.1 Flavonoid IFR low borderline
Aalbaalba5_s001210370454690.1 Flavonoid IFR high pass
Aalbaalba5_s001246180462810.1 Flavonoid IFR low borderline
Aalbaalba5_s001246380462870.1 Flavonoid IFR low borderline
Aalbaalba5_s001250070463650.1 Flavonoid IFR low borderline
Aalbaalba5_s001346200484100.1 Flavonoid IFR medium pass
Aalbaalba5_s001439320503070.1 Flavonoid IFR low borderline
Aalbaalba5_s001439320503070.2 Flavonoid IFR low borderline
Aalbaalba5_s001455060506450.1 Flavonoid IFR high pass
Aalbaalba5_s001463560508190.1 Flavonoid IFR medium pass
Aalbaalba5_s001567050528660.1 Flavonoid IFR medium pass
Aalbaalba5_s001650860544290.1 Flavonoid IFR medium pass
Aalbaalba5_s001662900546630.1 Flavonoid IFR low borderline