PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

1885
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Aalbaalba5_s000036260029900.1 Alkaloid T3O medium borderline
Aalbaalba5_s000036920030440.1 Alkaloid T3O medium borderline
Aalbaalba5_s000043950035130.1 Alkaloid T3O medium pass
Aalbaalba5_s000047850037730.1 Alkaloid T3O medium pass
Aalbaalba5_s000071440052650.1 Alkaloid T3O medium pass
Aalbaalba5_s000097920069150.1 Alkaloid T3O medium pass
Aalbaalba5_s000131840087170.1 Alkaloid T3O medium borderline
Aalbaalba5_s000137070089610.1 Alkaloid T3O low borderline
Aalbaalba5_s000147920095440.1 Alkaloid T3O medium pass
Aalbaalba5_s000166900105230.1 Alkaloid T3O medium pass
Aalbaalba5_s000176050109910.1 Alkaloid T3O low borderline
Aalbaalba5_s000181730113030.1 Alkaloid T3O medium pass
Aalbaalba5_s000181730113030.2 Alkaloid T3O low borderline
Aalbaalba5_s000192470118560.1 Alkaloid T3O low borderline
Aalbaalba5_s000203370123710.1 Alkaloid T3O low borderline
Aalbaalba5_s000219700130860.2 Alkaloid T3O medium pass
Aalbaalba5_s000251570145470.1 Alkaloid T3O medium borderline
Aalbaalba5_s000297210164940.1 Alkaloid T3O low borderline
Aalbaalba5_s000316380173640.1 Alkaloid T3O medium pass
Aalbaalba5_s000382280201780.1 Alkaloid T3O medium pass
Aalbaalba5_s000382280201780.2 Alkaloid T3O medium pass
Aalbaalba5_s000398930208620.1 Alkaloid T3O medium borderline
Aalbaalba5_s000450790231020.1 Alkaloid T3O low borderline
Aalbaalba5_s000450790231040.1 Alkaloid T3O low borderline
Aalbaalba5_s000465870237190.1 Alkaloid T3O low borderline
Aalbaalba5_s000499710250430.1 Alkaloid T3O medium pass
Aalbaalba5_s000543290266250.1 Alkaloid T3O medium borderline
Aalbaalba5_s000544300266610.1 Alkaloid T3O low borderline
Aalbaalba5_s000565240274240.1 Alkaloid T3O medium borderline
Aalbaalba5_s000577910278500.1 Alkaloid T3O medium pass
Aalbaalba5_s000599510285860.1 Alkaloid T3O medium pass
Aalbaalba5_s000616070291230.1 Alkaloid T3O medium borderline
Aalbaalba5_s000616070291230.2 Alkaloid T3O medium borderline
Aalbaalba5_s000631630296710.1 Alkaloid T3O low borderline
Aalbaalba5_s000641520300400.1 Alkaloid T3O medium pass
Aalbaalba5_s000661870306450.1 Alkaloid T3O medium borderline
Aalbaalba5_s000782330343170.1 Alkaloid T3O low borderline
Aalbaalba5_s000808880351450.1 Alkaloid T3O low borderline
Aalbaalba5_s000851300363280.1 Alkaloid T3O medium borderline
Aalbaalba5_s000889360374100.1 Alkaloid T3O medium borderline
Aalbaalba5_s000913880380930.1 Alkaloid T3O low borderline
Aalbaalba5_s000969580395560.1 Alkaloid T3O medium pass
Aalbaalba5_s000981980398900.1 Alkaloid T3O medium pass
Aalbaalba5_s000994400402170.1 Alkaloid T3O medium borderline
Aalbaalba5_s001029190411030.1 Alkaloid T3O medium borderline
Aalbaalba5_s001040100413510.1 Alkaloid T3O medium borderline
Aalbaalba5_s001062250419370.1 Alkaloid T3O medium pass
Aalbaalba5_s001211060454840.1 Alkaloid T3O low borderline
Aalbaalba5_s001311230476680.1 Alkaloid T3O medium pass
Aalbaalba5_s001346820484230.1 Alkaloid T3O low borderline