PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

2579
Candidate Protein Records
1885
Pathway-Level Records
4430
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Aalbaalba5_s002332900645910.1 Alkaloid NCS medium borderline
Aalbaalba5_s002380030651690.1 Alkaloid NCS medium borderline
Aalbaalba5_s003077560721720.1 Alkaloid NCS medium borderline
Aalbaalba5_s003135990726560.1 Alkaloid NCS medium borderline
Aalbaalba5_s003337840742010.1 Alkaloid NCS medium borderline
Aalbaalba5_s003671510763460.1 Alkaloid NCS low borderline
Aalbaalba5_s004096260788290.1 Alkaloid NCS medium borderline
Aalbaalba5_s004246330796320.1 Alkaloid NCS medium borderline
Aalbaalba5_s004266910797280.1 Alkaloid NCS medium borderline
Aalbaalba5_s004506090808580.1 Alkaloid NCS medium pass
Aalbaalba5_s005592900849320.1 Alkaloid NCS medium borderline
Aalbaalba5_s005592900849320.2 Alkaloid NCS medium borderline
Aalbaalba5_s000020340017890.1 Alkaloid NMT medium borderline
Aalbaalba5_s000113200077050.1 Alkaloid NMT low borderline
Aalbaalba5_s000114850077910.1 Alkaloid NMT medium pass
Aalbaalba5_s000188180116410.1 Alkaloid NMT medium pass
Aalbaalba5_s000188180116430.1 Alkaloid NMT medium pass
Aalbaalba5_s000250660145080.1 Alkaloid NMT medium pass
Aalbaalba5_s000251910145600.1 Alkaloid NMT low borderline
Aalbaalba5_s000251910145600.2 Alkaloid NMT low borderline
Aalbaalba5_s000341710184210.1 Alkaloid NMT low borderline
Aalbaalba5_s000368880195970.1 Alkaloid NMT medium borderline
Aalbaalba5_s000372920197680.1 Alkaloid NMT medium borderline
Aalbaalba5_s000377520199710.1 Alkaloid NMT medium borderline
Aalbaalba5_s000441840227190.1 Alkaloid NMT low borderline
Aalbaalba5_s000448060229970.1 Alkaloid NMT medium pass
Aalbaalba5_s000457600233870.1 Alkaloid NMT low borderline
Aalbaalba5_s000483260244340.1 Alkaloid NMT medium pass
Aalbaalba5_s000551690269440.1 Alkaloid NMT low borderline
Aalbaalba5_s000598920285710.1 Alkaloid NMT low borderline
Aalbaalba5_s000598920285710.2 Alkaloid NMT low borderline
Aalbaalba5_s000646610301910.1 Alkaloid NMT medium pass
Aalbaalba5_s000661690306410.1 Alkaloid NMT medium borderline
Aalbaalba5_s000743420331630.1 Alkaloid NMT medium borderline
Aalbaalba5_s000748960333240.1 Alkaloid NMT medium pass
Aalbaalba5_s000749120333340.1 Alkaloid NMT medium borderline
Aalbaalba5_s000753740334640.1 Alkaloid NMT medium borderline
Aalbaalba5_s000769000339420.1 Alkaloid NMT medium pass
Aalbaalba5_s000769000339420.2 Alkaloid NMT medium pass
Aalbaalba5_s000769000339420.3 Alkaloid NMT low borderline
Aalbaalba5_s000824720356040.1 Alkaloid NMT medium pass
Aalbaalba5_s000882810372250.1 Alkaloid NMT medium pass
Aalbaalba5_s000899630376820.1 Alkaloid NMT medium pass
Aalbaalba5_s000899630376820.2 Alkaloid NMT medium pass
Aalbaalba5_s000902420377650.1 Alkaloid NMT medium pass
Aalbaalba5_s000905220378420.1 Alkaloid NMT medium pass
Aalbaalba5_s000915630381280.1 Alkaloid NMT medium pass
Aalbaalba5_s000984100399470.1 Alkaloid NMT medium pass
Aalbaalba5_s000984100399470.2 Alkaloid NMT medium pass
Aalbaalba5_s001001680404060.1 Alkaloid NMT medium pass