PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

1885
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Aalbaalba5_s001189350450020.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s001217680456530.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s001387130492900.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s001412750498040.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s001412750498060.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s001452400505830.1 Rosmarinic Acid 4CL low borderline
Aalbaalba5_s001464880508520.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s001487210513210.1 Rosmarinic Acid 4CL low borderline
Aalbaalba5_s001525300520560.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s001594930533790.1 Rosmarinic Acid 4CL low borderline
Aalbaalba5_s001624930539540.1 Rosmarinic Acid 4CL low borderline
Aalbaalba5_s001657290545640.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s001687920551070.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s001707790554740.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s001808680571000.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s001808680571000.2 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s001866540580450.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s001875970582180.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s001883890583290.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s001887950583800.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s001893390584700.1 Rosmarinic Acid 4CL low borderline
Aalbaalba5_s001902590586260.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s001902590586260.2 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s001932080590900.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s002098950615370.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s002159220623670.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s002169690625310.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s002172140625770.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s002333200645950.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s002354980648690.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s002393040653380.1 Rosmarinic Acid 4CL low borderline
Aalbaalba5_s002425880657270.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s002482860663830.1 Rosmarinic Acid 4CL low borderline
Aalbaalba5_s002505380666270.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s002515370667360.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s002553570672000.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s002824410699500.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s002826550699770.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s003113330724620.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s003194790731170.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s003254210735740.1 Rosmarinic Acid 4CL low borderline
Aalbaalba5_s003314240740370.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s003718010766610.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s003814060772560.1 Rosmarinic Acid 4CL low borderline
Aalbaalba5_s003958990780150.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s004032460784540.1 Rosmarinic Acid 4CL low borderline
Aalbaalba5_s004301480799140.1 Rosmarinic Acid 4CL low borderline
Aalbaalba5_s004842190822600.1 Rosmarinic Acid 4CL medium pass
Aalbaalba5_s004922000825930.1 Rosmarinic Acid 4CL low borderline
Aalbaalba5_s004990370829070.1 Rosmarinic Acid 4CL medium pass