PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

891
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Gene Pathway Family Confidence Status
Aaltescaffold_40331340 Terpenoid BAHD medium pass
Aaltescaffold_40333540 Terpenoid BAHD low borderline
Aaltescaffold_40337850 Terpenoid BAHD medium pass
Aaltescaffold_40337880 Terpenoid BAHD medium pass
Aaltescaffold_40345070 Terpenoid BAHD medium pass
Aaltescaffold_40348950 Terpenoid BAHD low borderline
Aaltescaffold_50392760 Terpenoid BAHD low borderline
Aaltescaffold_50404060 Terpenoid BAHD medium pass
Aaltescaffold_60411850 Terpenoid BAHD medium pass
Aaltescaffold_60415940 Terpenoid BAHD medium pass
Aaltescaffold_60422750 Terpenoid BAHD low borderline
Aaltescaffold_60428620 Terpenoid BAHD medium pass
Aaltescaffold_60434710 Terpenoid BAHD medium pass
Aaltescaffold_60435190 Terpenoid BAHD medium pass
Aaltescaffold_60435320 Terpenoid BAHD medium pass
Aaltescaffold_60435350 Terpenoid BAHD low borderline
Aaltescaffold_60435370 Terpenoid BAHD low borderline
Aaltescaffold_60437210 Terpenoid BAHD medium pass
Aaltescaffold_70451240 Terpenoid BAHD medium pass
Aaltescaffold_70457000 Terpenoid BAHD low borderline
Aaltescaffold_80467900 Terpenoid BAHD medium pass
Aaltescaffold_80471090 Terpenoid BAHD low borderline
Aaltescaffold_80472650 Terpenoid BAHD medium pass
Aaltescaffold_80478290 Terpenoid BAHD medium pass
Aaltescaffold_80479490 Terpenoid BAHD medium borderline
Aaltescaffold_80482030 Terpenoid BAHD medium pass
Aaltescaffold_80482220 Terpenoid BAHD low borderline
Aaltescaffold_80482450 Terpenoid BAHD low borderline
Aaltescaffold_80487170 Terpenoid BAHD low borderline
Aaltescaffold_80487270 Terpenoid BAHD medium pass
Aaltescaffold_80487300 Terpenoid BAHD medium pass
Aaltescaffold_80499310 Terpenoid BAHD medium pass
Aaltescaffold_80499840 Terpenoid BAHD medium pass
Aaltescaffold_90506660 Terpenoid BAHD low borderline
Aaltescaffold_90512060 Terpenoid BAHD medium pass
Aaltescaffold_90512220 Terpenoid BAHD low borderline
Aaltescaffold_90512560 Terpenoid BAHD medium pass
Aaltescaffold_90517060 Terpenoid BAHD low borderline
Aaltescaffold_90517240 Terpenoid BAHD medium pass
Aaltescaffold_90518460 Terpenoid BAHD medium pass
Aaltescaffold_90519970 Terpenoid BAHD low borderline
Aaltescaffold_90522240 Terpenoid BAHD low borderline
Aaltescaffold_90524180 Terpenoid BAHD low borderline
Aaltescaffold_90529440 Terpenoid BAHD medium borderline
Aaltescaffold_90530700 Terpenoid BAHD low borderline
Aaltescaffold_90532440 Terpenoid BAHD low borderline
Aaltescaffold_90532580 Terpenoid BAHD medium pass
Aaltescaffold_90533710 Terpenoid BAHD medium pass