PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

1162
Candidate Protein Records
891
Pathway-Level Records
2303
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
Aaltescaffold_10033710 Flavonoid C4H medium borderline
Aaltescaffold_10053730 Flavonoid C4H medium borderline
Aaltescaffold_60427060 Flavonoid C4H low borderline
Aaltescaffold_80500950 Flavonoid C4H medium borderline
Aaltescaffold_100084370 Rosmarinic Acid C4H medium pass
Aaltescaffold_100084610 Rosmarinic Acid C4H low borderline
Aaltescaffold_100085420 Rosmarinic Acid C4H low borderline
Aaltescaffold_100086470 Rosmarinic Acid C4H medium pass
Aaltescaffold_100086480 Rosmarinic Acid C4H medium pass
Aaltescaffold_100086490 Rosmarinic Acid C4H low borderline
Aaltescaffold_100086500 Rosmarinic Acid C4H low borderline
Aaltescaffold_100095640 Rosmarinic Acid C4H medium pass
Aaltescaffold_100100240 Rosmarinic Acid C4H medium pass
Aaltescaffold_100106570 Rosmarinic Acid C4H medium pass
Aaltescaffold_100107480 Rosmarinic Acid C4H low borderline
Aaltescaffold_100113980 Rosmarinic Acid C4H low borderline
Aaltescaffold_100115180 Rosmarinic Acid C4H medium pass
Aaltescaffold_100120280 Rosmarinic Acid C4H low borderline
Aaltescaffold_10017420 Rosmarinic Acid C4H low borderline
Aaltescaffold_10033710 Rosmarinic Acid C4H medium pass
Aaltescaffold_10042180 Rosmarinic Acid C4H low borderline
Aaltescaffold_10042190 Rosmarinic Acid C4H low borderline
Aaltescaffold_10053730 Rosmarinic Acid C4H medium pass
Aaltescaffold_20183690 Rosmarinic Acid C4H low borderline
Aaltescaffold_20185470 Rosmarinic Acid C4H low borderline
Aaltescaffold_20185650 Rosmarinic Acid C4H low borderline
Aaltescaffold_20186850 Rosmarinic Acid C4H low borderline
Aaltescaffold_20191620 Rosmarinic Acid C4H low borderline
Aaltescaffold_20191630 Rosmarinic Acid C4H low borderline
Aaltescaffold_20193230 Rosmarinic Acid C4H low borderline
Aaltescaffold_20194750 Rosmarinic Acid C4H medium pass
Aaltescaffold_20207910 Rosmarinic Acid C4H low borderline
Aaltescaffold_20210690 Rosmarinic Acid C4H medium pass
Aaltescaffold_20211390 Rosmarinic Acid C4H low borderline
Aaltescaffold_20211460 Rosmarinic Acid C4H medium pass
Aaltescaffold_20211870 Rosmarinic Acid C4H low borderline
Aaltescaffold_20214030 Rosmarinic Acid C4H low borderline
Aaltescaffold_20214050 Rosmarinic Acid C4H low borderline
Aaltescaffold_20214240 Rosmarinic Acid C4H low borderline
Aaltescaffold_20214790 Rosmarinic Acid C4H low borderline
Aaltescaffold_20214900 Rosmarinic Acid C4H low borderline
Aaltescaffold_20217460 Rosmarinic Acid C4H low borderline
Aaltescaffold_20217480 Rosmarinic Acid C4H low borderline
Aaltescaffold_20221720 Rosmarinic Acid C4H low borderline
Aaltescaffold_20223480 Rosmarinic Acid C4H low borderline
Aaltescaffold_20235750 Rosmarinic Acid C4H medium pass
Aaltescaffold_30266160 Rosmarinic Acid C4H low borderline
Aaltescaffold_30266760 Rosmarinic Acid C4H low borderline
Aaltescaffold_30277650 Rosmarinic Acid C4H low borderline
Aaltescaffold_30286480 Rosmarinic Acid C4H low borderline