PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

891
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Aaltescaffold_30301030 Rosmarinic Acid C4H low borderline
Aaltescaffold_30301040 Rosmarinic Acid C4H low borderline
Aaltescaffold_30307250 Rosmarinic Acid C4H low borderline
Aaltescaffold_30308470 Rosmarinic Acid C4H medium pass
Aaltescaffold_30310040 Rosmarinic Acid C4H low borderline
Aaltescaffold_30310050 Rosmarinic Acid C4H medium pass
Aaltescaffold_40324820 Rosmarinic Acid C4H low borderline
Aaltescaffold_40324910 Rosmarinic Acid C4H low borderline
Aaltescaffold_40332540 Rosmarinic Acid C4H low borderline
Aaltescaffold_40332600 Rosmarinic Acid C4H low borderline
Aaltescaffold_40334010 Rosmarinic Acid C4H low borderline
Aaltescaffold_40334630 Rosmarinic Acid C4H medium pass
Aaltescaffold_40335230 Rosmarinic Acid C4H low borderline
Aaltescaffold_40336670 Rosmarinic Acid C4H low borderline
Aaltescaffold_40342460 Rosmarinic Acid C4H low borderline
Aaltescaffold_40344940 Rosmarinic Acid C4H low borderline
Aaltescaffold_40347110 Rosmarinic Acid C4H low borderline
Aaltescaffold_40351840 Rosmarinic Acid C4H low borderline
Aaltescaffold_40352470 Rosmarinic Acid C4H medium pass
Aaltescaffold_40352660 Rosmarinic Acid C4H low borderline
Aaltescaffold_40353420 Rosmarinic Acid C4H low borderline
Aaltescaffold_50362140 Rosmarinic Acid C4H low borderline
Aaltescaffold_50362340 Rosmarinic Acid C4H low borderline
Aaltescaffold_50362370 Rosmarinic Acid C4H low borderline
Aaltescaffold_50362670 Rosmarinic Acid C4H low borderline
Aaltescaffold_50368770 Rosmarinic Acid C4H medium pass
Aaltescaffold_50369900 Rosmarinic Acid C4H low borderline
Aaltescaffold_50370440 Rosmarinic Acid C4H medium pass
Aaltescaffold_50370530 Rosmarinic Acid C4H medium pass
Aaltescaffold_50370770 Rosmarinic Acid C4H low borderline
Aaltescaffold_50376140 Rosmarinic Acid C4H medium pass
Aaltescaffold_50380150 Rosmarinic Acid C4H low borderline
Aaltescaffold_50380450 Rosmarinic Acid C4H low borderline
Aaltescaffold_50380460 Rosmarinic Acid C4H low borderline
Aaltescaffold_50380470 Rosmarinic Acid C4H low borderline
Aaltescaffold_50381130 Rosmarinic Acid C4H low borderline
Aaltescaffold_50400100 Rosmarinic Acid C4H low borderline
Aaltescaffold_50407580 Rosmarinic Acid C4H medium pass
Aaltescaffold_50407790 Rosmarinic Acid C4H low borderline
Aaltescaffold_50407890 Rosmarinic Acid C4H low borderline
Aaltescaffold_50407910 Rosmarinic Acid C4H low borderline
Aaltescaffold_50407960 Rosmarinic Acid C4H low borderline
Aaltescaffold_60413380 Rosmarinic Acid C4H low borderline
Aaltescaffold_60413480 Rosmarinic Acid C4H low borderline
Aaltescaffold_60418330 Rosmarinic Acid C4H medium pass
Aaltescaffold_60421190 Rosmarinic Acid C4H low borderline
Aaltescaffold_60422670 Rosmarinic Acid C4H low borderline
Aaltescaffold_60422680 Rosmarinic Acid C4H low borderline
Aaltescaffold_60422690 Rosmarinic Acid C4H low borderline
Aaltescaffold_60423680 Rosmarinic Acid C4H low borderline