PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

891
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Aaltescaffold_100101080 Phenylpropanoid 4CL medium pass
Aaltescaffold_100121800 Phenylpropanoid 4CL medium pass
Aaltescaffold_100123140 Phenylpropanoid 4CL medium pass
Aaltescaffold_10059620 Phenylpropanoid 4CL low borderline
Aaltescaffold_10072140 Phenylpropanoid 4CL low borderline
Aaltescaffold_10073780 Phenylpropanoid 4CL medium pass
Aaltescaffold_10074910 Phenylpropanoid 4CL medium pass
Aaltescaffold_20186420 Phenylpropanoid 4CL medium pass
Aaltescaffold_20197280 Phenylpropanoid 4CL medium pass
Aaltescaffold_20198700 Phenylpropanoid 4CL low borderline
Aaltescaffold_20204570 Phenylpropanoid 4CL medium pass
Aaltescaffold_20209510 Phenylpropanoid 4CL low borderline
Aaltescaffold_20214160 Phenylpropanoid 4CL low borderline
Aaltescaffold_20225210 Phenylpropanoid 4CL medium pass
Aaltescaffold_20231710 Phenylpropanoid 4CL low borderline
Aaltescaffold_30249050 Phenylpropanoid 4CL low borderline
Aaltescaffold_30253850 Phenylpropanoid 4CL medium pass
Aaltescaffold_30268970 Phenylpropanoid 4CL medium pass
Aaltescaffold_40346940 Phenylpropanoid 4CL medium pass
Aaltescaffold_50364030 Phenylpropanoid 4CL low borderline
Aaltescaffold_50382790 Phenylpropanoid 4CL low borderline
Aaltescaffold_50383350 Phenylpropanoid 4CL low borderline
Aaltescaffold_50383360 Phenylpropanoid 4CL low borderline
Aaltescaffold_60418210 Phenylpropanoid 4CL low borderline
Aaltescaffold_60424440 Phenylpropanoid 4CL medium pass
Aaltescaffold_70445610 Phenylpropanoid 4CL medium pass
Aaltescaffold_70449350 Phenylpropanoid 4CL medium pass
Aaltescaffold_70460080 Phenylpropanoid 4CL low borderline
Aaltescaffold_70461580 Phenylpropanoid 4CL low borderline
Aaltescaffold_80484650 Phenylpropanoid 4CL low borderline
Aaltescaffold_90528040 Phenylpropanoid 4CL medium pass
Aaltescaffold_10007690 Phenylpropanoid C3'H/CYP98A low borderline
Aaltescaffold_100084370 Phenylpropanoid C3'H/CYP98A medium borderline
Aaltescaffold_100084610 Phenylpropanoid C3'H/CYP98A medium borderline
Aaltescaffold_100084940 Phenylpropanoid C3'H/CYP98A low borderline
Aaltescaffold_100085420 Phenylpropanoid C3'H/CYP98A low borderline
Aaltescaffold_100086470 Phenylpropanoid C3'H/CYP98A medium borderline
Aaltescaffold_100086480 Phenylpropanoid C3'H/CYP98A medium borderline
Aaltescaffold_100086490 Phenylpropanoid C3'H/CYP98A medium borderline
Aaltescaffold_100086500 Phenylpropanoid C3'H/CYP98A medium borderline
Aaltescaffold_100095640 Phenylpropanoid C3'H/CYP98A medium borderline
Aaltescaffold_100100240 Phenylpropanoid C3'H/CYP98A medium borderline
Aaltescaffold_100106570 Phenylpropanoid C3'H/CYP98A medium borderline
Aaltescaffold_100107480 Phenylpropanoid C3'H/CYP98A medium borderline
Aaltescaffold_100113980 Phenylpropanoid C3'H/CYP98A low borderline
Aaltescaffold_100115180 Phenylpropanoid C3'H/CYP98A medium borderline
Aaltescaffold_100120280 Phenylpropanoid C3'H/CYP98A medium borderline
Aaltescaffold_10017420 Phenylpropanoid C3'H/CYP98A low borderline
Aaltescaffold_10033710 Phenylpropanoid C3'H/CYP98A medium borderline
Aaltescaffold_10053730 Phenylpropanoid C3'H/CYP98A medium borderline