PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

1162
Candidate Protein Records
891
Pathway-Level Records
2303
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Aaltescaffold_30310050 Flavonoid IFS medium borderline
Aaltescaffold_40324820 Flavonoid IFS medium borderline
Aaltescaffold_40324910 Flavonoid IFS low borderline
Aaltescaffold_40332600 Flavonoid IFS low borderline
Aaltescaffold_40335230 Flavonoid IFS low borderline
Aaltescaffold_40336670 Flavonoid IFS medium borderline
Aaltescaffold_40347110 Flavonoid IFS medium borderline
Aaltescaffold_40351840 Flavonoid IFS medium borderline
Aaltescaffold_40352470 Flavonoid IFS medium borderline
Aaltescaffold_40352660 Flavonoid IFS medium borderline
Aaltescaffold_50376140 Flavonoid IFS medium borderline
Aaltescaffold_50400100 Flavonoid IFS low borderline
Aaltescaffold_50407790 Flavonoid IFS medium borderline
Aaltescaffold_50407890 Flavonoid IFS medium borderline
Aaltescaffold_50407910 Flavonoid IFS medium borderline
Aaltescaffold_50408440 Flavonoid IFS low borderline
Aaltescaffold_60413480 Flavonoid IFS medium borderline
Aaltescaffold_60422670 Flavonoid IFS medium borderline
Aaltescaffold_60422680 Flavonoid IFS medium borderline
Aaltescaffold_60422690 Flavonoid IFS medium borderline
Aaltescaffold_60423630 Flavonoid IFS low borderline
Aaltescaffold_60423680 Flavonoid IFS low borderline
Aaltescaffold_60425610 Flavonoid IFS medium borderline
Aaltescaffold_60427510 Flavonoid IFS low borderline
Aaltescaffold_60434230 Flavonoid IFS medium borderline
Aaltescaffold_60436910 Flavonoid IFS medium borderline
Aaltescaffold_70443100 Flavonoid IFS low borderline
Aaltescaffold_70444230 Flavonoid IFS low borderline
Aaltescaffold_70445600 Flavonoid IFS medium borderline
Aaltescaffold_70447360 Flavonoid IFS low borderline
Aaltescaffold_70447380 Flavonoid IFS low borderline
Aaltescaffold_70449280 Flavonoid IFS low borderline
Aaltescaffold_70461770 Flavonoid IFS medium borderline
Aaltescaffold_80490410 Flavonoid IFS low borderline
Aaltescaffold_80492400 Flavonoid IFS low borderline
Aaltescaffold_80501090 Flavonoid IFS low borderline
Aaltescaffold_90506340 Flavonoid IFS medium borderline
Aaltescaffold_90506870 Flavonoid IFS low borderline
Aaltescaffold_90506930 Flavonoid IFS low borderline
Aaltescaffold_90506970 Flavonoid IFS low borderline
Aaltescaffold_90508030 Flavonoid IFS medium borderline
Aaltescaffold_90512070 Flavonoid IFS low borderline
Aaltescaffold_90513580 Flavonoid IFS medium borderline
Aaltescaffold_90522250 Flavonoid IFS medium borderline
Aaltescaffold_90528650 Flavonoid IFS low borderline
Aaltescaffold_10001710 Flavonoid PAL high pass
Aaltescaffold_10001740 Flavonoid PAL medium pass
Aaltescaffold_10001750 Flavonoid PAL medium pass
Aaltescaffold_10004130 Flavonoid PAL medium pass
Aaltescaffold_10004140 Flavonoid PAL medium pass