PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

1162
Candidate Protein Records
891
Pathway-Level Records
2303
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Aaltescaffold_10004200 Flavonoid PAL high pass
Aaltescaffold_10004250 Flavonoid PAL high pass
Aaltescaffold_10004390 Flavonoid PAL high pass
Aaltescaffold_10004420 Flavonoid PAL high pass
Aaltescaffold_10004460 Flavonoid PAL high pass
Aaltescaffold_10004500 Flavonoid PAL high pass
Aaltescaffold_10007050 Flavonoid PAL medium pass
Aaltescaffold_10007060 Flavonoid PAL high pass
Aaltescaffold_10007090 Flavonoid PAL high pass
Aaltescaffold_100086850 Flavonoid PAL medium pass
Aaltescaffold_100086890 Flavonoid PAL medium pass
Aaltescaffold_100087080 Flavonoid PAL low borderline
Aaltescaffold_10061790 Flavonoid PAL high pass
Aaltescaffold_110138000 Flavonoid PAL low borderline
Aaltescaffold_20189550 Flavonoid PAL low borderline
Aaltescaffold_20191420 Flavonoid PAL high pass
Aaltescaffold_20207230 Flavonoid PAL medium pass
Aaltescaffold_20210370 Flavonoid PAL low borderline
Aaltescaffold_20227370 Flavonoid PAL high pass
Aaltescaffold_20227430 Flavonoid PAL high pass
Aaltescaffold_30290750 Flavonoid PAL high pass
Aaltescaffold_30301550 Flavonoid PAL high pass
Aaltescaffold_30308450 Flavonoid PAL high pass
Aaltescaffold_40327350 Flavonoid PAL medium pass
Aaltescaffold_40328210 Flavonoid PAL medium pass
Aaltescaffold_40328220 Flavonoid PAL medium pass
Aaltescaffold_40330020 Flavonoid PAL high pass
Aaltescaffold_50374440 Flavonoid PAL high pass
Aaltescaffold_50374480 Flavonoid PAL high pass
Aaltescaffold_50396030 Flavonoid PAL medium pass
Aaltescaffold_70461840 Flavonoid PAL medium pass
Aaltescaffold_70461850 Flavonoid PAL high pass
Aaltescaffold_70461860 Flavonoid PAL medium pass
Aaltescaffold_80484670 Flavonoid PAL high pass
Aaltescaffold_90523420 Flavonoid PAL high pass
Aaltescaffold_90523440 Flavonoid PAL high pass
Aaltescaffold_90523810 Flavonoid PAL high pass
Aaltescaffold_100089900 Flavonoid UFGT medium pass
Aaltescaffold_100089910 Flavonoid UFGT medium pass
Aaltescaffold_100089920 Flavonoid UFGT low borderline
Aaltescaffold_100089930 Flavonoid UFGT low borderline
Aaltescaffold_100089950 Flavonoid UFGT medium pass
Aaltescaffold_100089990 Flavonoid UFGT medium pass
Aaltescaffold_100099350 Flavonoid UFGT medium pass
Aaltescaffold_100103120 Flavonoid UFGT low borderline
Aaltescaffold_100108970 Flavonoid UFGT medium pass
Aaltescaffold_100115380 Flavonoid UFGT medium pass
Aaltescaffold_100115550 Flavonoid UFGT low borderline
Aaltescaffold_10032110 Flavonoid UFGT medium pass
Aaltescaffold_10077750 Flavonoid UFGT low borderline