PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

1162
Candidate Protein Records
891
Pathway-Level Records
2303
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Aaltescaffold_20201370 Flavonoid UFGT high pass
Aaltescaffold_20201390 Flavonoid UFGT medium pass
Aaltescaffold_20204720 Flavonoid UFGT medium pass
Aaltescaffold_20208460 Flavonoid UFGT medium pass
Aaltescaffold_20218730 Flavonoid UFGT medium pass
Aaltescaffold_20218760 Flavonoid UFGT high pass
Aaltescaffold_20218950 Flavonoid UFGT high pass
Aaltescaffold_20223980 Flavonoid UFGT medium pass
Aaltescaffold_30272580 Flavonoid UFGT medium pass
Aaltescaffold_30310280 Flavonoid UFGT medium pass
Aaltescaffold_40346640 Flavonoid UFGT medium pass
Aaltescaffold_50367040 Flavonoid UFGT low borderline
Aaltescaffold_50387220 Flavonoid UFGT low borderline
Aaltescaffold_50388700 Flavonoid UFGT medium pass
Aaltescaffold_50388750 Flavonoid UFGT medium pass
Aaltescaffold_50388780 Flavonoid UFGT medium pass
Aaltescaffold_50388790 Flavonoid UFGT medium pass
Aaltescaffold_50388800 Flavonoid UFGT medium pass
Aaltescaffold_60419190 Flavonoid UFGT high pass
Aaltescaffold_60419210 Flavonoid UFGT high pass
Aaltescaffold_60419690 Flavonoid UFGT low borderline
Aaltescaffold_60419710 Flavonoid UFGT medium pass
Aaltescaffold_60424860 Flavonoid UFGT medium pass
Aaltescaffold_60433500 Flavonoid UFGT medium pass
Aaltescaffold_70442960 Flavonoid UFGT low borderline
Aaltescaffold_70454170 Flavonoid UFGT medium pass
Aaltescaffold_80475410 Flavonoid UFGT medium pass
Aaltescaffold_80479500 Flavonoid UFGT medium pass
Aaltescaffold_80489210 Flavonoid UFGT high pass
Aaltescaffold_80489260 Flavonoid UFGT high pass
Aaltescaffold_80492300 Flavonoid UFGT medium pass
Aaltescaffold_80492430 Flavonoid UFGT medium pass
Aaltescaffold_80495000 Flavonoid UFGT medium pass
Aaltescaffold_80495930 Flavonoid UFGT low borderline
Aaltescaffold_90532470 Flavonoid UFGT low borderline
Aaltescaffold_100101080 Phenylpropanoid 4CL medium pass
Aaltescaffold_100121800 Phenylpropanoid 4CL medium pass
Aaltescaffold_100123140 Phenylpropanoid 4CL medium pass
Aaltescaffold_10059620 Phenylpropanoid 4CL low borderline
Aaltescaffold_10072140 Phenylpropanoid 4CL low borderline
Aaltescaffold_10073780 Phenylpropanoid 4CL medium pass
Aaltescaffold_10074910 Phenylpropanoid 4CL medium pass
Aaltescaffold_20186420 Phenylpropanoid 4CL medium pass
Aaltescaffold_20197280 Phenylpropanoid 4CL medium pass
Aaltescaffold_20198700 Phenylpropanoid 4CL low borderline
Aaltescaffold_20204570 Phenylpropanoid 4CL medium pass
Aaltescaffold_20209510 Phenylpropanoid 4CL low borderline
Aaltescaffold_20214160 Phenylpropanoid 4CL low borderline
Aaltescaffold_20225210 Phenylpropanoid 4CL medium pass
Aaltescaffold_20231710 Phenylpropanoid 4CL low borderline