PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

891
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Aaltescaffold_100115380 Alkaloid 7DLGT low borderline
Aaltescaffold_100115540 Alkaloid 7DLGT low borderline
Aaltescaffold_10032110 Alkaloid 7DLGT low borderline
Aaltescaffold_20201370 Alkaloid 7DLGT low borderline
Aaltescaffold_20201390 Alkaloid 7DLGT low borderline
Aaltescaffold_20204720 Alkaloid 7DLGT low borderline
Aaltescaffold_20208460 Alkaloid 7DLGT medium pass
Aaltescaffold_20218730 Alkaloid 7DLGT low borderline
Aaltescaffold_20218760 Alkaloid 7DLGT medium pass
Aaltescaffold_20218950 Alkaloid 7DLGT medium pass
Aaltescaffold_20223980 Alkaloid 7DLGT low borderline
Aaltescaffold_30272580 Alkaloid 7DLGT low borderline
Aaltescaffold_30310280 Alkaloid 7DLGT low borderline
Aaltescaffold_40346640 Alkaloid 7DLGT low borderline
Aaltescaffold_50388700 Alkaloid 7DLGT medium pass
Aaltescaffold_50388750 Alkaloid 7DLGT low borderline
Aaltescaffold_50388780 Alkaloid 7DLGT low borderline
Aaltescaffold_50388790 Alkaloid 7DLGT low borderline
Aaltescaffold_50388800 Alkaloid 7DLGT low borderline
Aaltescaffold_60419190 Alkaloid 7DLGT high pass
Aaltescaffold_60419210 Alkaloid 7DLGT medium pass
Aaltescaffold_60419680 Alkaloid 7DLGT high pass
Aaltescaffold_60419690 Alkaloid 7DLGT medium pass
Aaltescaffold_60419710 Alkaloid 7DLGT low borderline
Aaltescaffold_60424860 Alkaloid 7DLGT medium pass
Aaltescaffold_60433500 Alkaloid 7DLGT low borderline
Aaltescaffold_70442960 Alkaloid 7DLGT low borderline
Aaltescaffold_70454170 Alkaloid 7DLGT low borderline
Aaltescaffold_80475410 Alkaloid 7DLGT medium pass
Aaltescaffold_80479500 Alkaloid 7DLGT medium pass
Aaltescaffold_80489210 Alkaloid 7DLGT medium pass
Aaltescaffold_80489260 Alkaloid 7DLGT medium pass
Aaltescaffold_80492300 Alkaloid 7DLGT medium pass
Aaltescaffold_80492430 Alkaloid 7DLGT medium pass
Aaltescaffold_80495000 Alkaloid 7DLGT high pass
Aaltescaffold_100113980 Alkaloid 7DLH medium borderline
Aaltescaffold_120175100 Alkaloid 7DLH medium borderline
Aaltescaffold_120175160 Alkaloid 7DLH medium borderline
Aaltescaffold_20214240 Alkaloid 7DLH medium borderline
Aaltescaffold_30266760 Alkaloid 7DLH medium borderline
Aaltescaffold_30273210 Alkaloid 7DLH low borderline
Aaltescaffold_50399740 Alkaloid 7DLH medium borderline
Aaltescaffold_70443100 Alkaloid 7DLH medium borderline
Aaltescaffold_70449320 Alkaloid 7DLH medium borderline
Aaltescaffold_90506870 Alkaloid 7DLH medium borderline
Aaltescaffold_90506930 Alkaloid 7DLH medium borderline
Aaltescaffold_90506970 Alkaloid 7DLH medium borderline
Aaltescaffold_100105720 Alkaloid 8HGO medium borderline
Aaltescaffold_100108180 Alkaloid 8HGO medium borderline
Aaltescaffold_20194880 Alkaloid 8HGO medium borderline