PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

891
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Aaltescaffold_20224950 Alkaloid 8HGO medium borderline
Aaltescaffold_40323590 Alkaloid 8HGO medium borderline
Aaltescaffold_40324920 Alkaloid 8HGO medium borderline
Aaltescaffold_50408460 Alkaloid 8HGO low borderline
Aaltescaffold_60431350 Alkaloid 8HGO low borderline
Aaltescaffold_70457120 Alkaloid 8HGO medium borderline
Aaltescaffold_60429280 Alkaloid ADC medium pass
Aaltescaffold_80468050 Alkaloid ADC medium pass
Aaltescaffold_100106840 Alkaloid BBE low borderline
Aaltescaffold_10067500 Alkaloid BBE low borderline
Aaltescaffold_40344910 Alkaloid BBE low borderline
Aaltescaffold_70445680 Alkaloid BBE low borderline
Aaltescaffold_70451000 Alkaloid BBE low borderline
Aaltescaffold_70451030 Alkaloid BBE low borderline
Aaltescaffold_70451090 Alkaloid BBE low borderline
Aaltescaffold_80479360 Alkaloid BBE low borderline
Aaltescaffold_100107870 Alkaloid CNMT low borderline
Aaltescaffold_10027080 Alkaloid CNMT low borderline
Aaltescaffold_10027960 Alkaloid CNMT low borderline
Aaltescaffold_20190240 Alkaloid CNMT medium borderline
Aaltescaffold_20212650 Alkaloid CNMT low borderline
Aaltescaffold_20216040 Alkaloid CNMT medium pass
Aaltescaffold_40342770 Alkaloid CNMT low borderline
Aaltescaffold_80471610 Alkaloid CNMT low borderline
Aaltescaffold_80480210 Alkaloid CNMT low borderline
Aaltescaffold_100084850 Alkaloid CODM/T6ODM medium borderline
Aaltescaffold_100084870 Alkaloid CODM/T6ODM medium borderline
Aaltescaffold_100089180 Alkaloid CODM/T6ODM medium borderline
Aaltescaffold_100120150 Alkaloid CODM/T6ODM medium borderline
Aaltescaffold_10012870 Alkaloid CODM/T6ODM medium borderline
Aaltescaffold_20193090 Alkaloid CODM/T6ODM medium borderline
Aaltescaffold_40339070 Alkaloid CODM/T6ODM medium borderline
Aaltescaffold_40339080 Alkaloid CODM/T6ODM medium borderline
Aaltescaffold_40342250 Alkaloid CODM/T6ODM medium borderline
Aaltescaffold_40344980 Alkaloid CODM/T6ODM medium borderline
Aaltescaffold_60415760 Alkaloid CODM/T6ODM medium borderline
Aaltescaffold_60415790 Alkaloid CODM/T6ODM medium borderline
Aaltescaffold_60425430 Alkaloid CODM/T6ODM medium borderline
Aaltescaffold_60425480 Alkaloid CODM/T6ODM medium borderline
Aaltescaffold_60427830 Alkaloid CODM/T6ODM medium borderline
Aaltescaffold_70447790 Alkaloid CODM/T6ODM medium borderline
Aaltescaffold_70449680 Alkaloid CODM/T6ODM medium borderline
Aaltescaffold_70463910 Alkaloid CODM/T6ODM medium borderline
Aaltescaffold_80471290 Alkaloid CODM/T6ODM medium borderline
Aaltescaffold_80475700 Alkaloid CODM/T6ODM medium borderline
Aaltescaffold_80493600 Alkaloid CODM/T6ODM medium borderline
Aaltescaffold_80496190 Alkaloid CODM/T6ODM medium borderline
Aaltescaffold_80496270 Alkaloid CODM/T6ODM medium borderline
Aaltescaffold_80496280 Alkaloid CODM/T6ODM medium borderline
Aaltescaffold_80498750 Alkaloid CODM/T6ODM medium borderline