PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

891
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Aaltescaffold_90514550 Alkaloid CODM/T6ODM medium borderline
Aaltescaffold_10001720 Alkaloid COR medium pass
Aaltescaffold_10001880 Alkaloid COR medium pass
Aaltescaffold_100095630 Alkaloid COR medium pass
Aaltescaffold_10037090 Alkaloid COR medium pass
Aaltescaffold_10039690 Alkaloid COR medium pass
Aaltescaffold_20213140 Alkaloid COR medium pass
Aaltescaffold_30257060 Alkaloid COR medium pass
Aaltescaffold_30310240 Alkaloid COR medium pass
Aaltescaffold_60427520 Alkaloid COR medium pass
Aaltescaffold_60437320 Alkaloid COR medium pass
Aaltescaffold_70466150 Alkaloid COR medium pass
Aaltescaffold_80467910 Alkaloid COR medium pass
Aaltescaffold_80473760 Alkaloid COR medium pass
Aaltescaffold_40345010 Alkaloid CYP719 medium borderline
Aaltescaffold_60423440 Alkaloid CYP719 low borderline
Aaltescaffold_60423680 Alkaloid CYP719 medium borderline
Aaltescaffold_80482410 Alkaloid CYP719 medium borderline
Aaltescaffold_10042190 Alkaloid CYP80B1 medium borderline
Aaltescaffold_20191630 Alkaloid CYP80B1 medium borderline
Aaltescaffold_20214790 Alkaloid CYP80B1 medium borderline
Aaltescaffold_50362140 Alkaloid CYP80B1 medium borderline
Aaltescaffold_50362670 Alkaloid CYP80B1 medium borderline
Aaltescaffold_60422700 Alkaloid CYP80B1 medium borderline
Aaltescaffold_60423630 Alkaloid CYP80B1 medium borderline
Aaltescaffold_60437560 Alkaloid CYP80B1 medium borderline
Aaltescaffold_100084610 Alkaloid G8O/G8H medium borderline
Aaltescaffold_100119250 Alkaloid G8O/G8H low borderline
Aaltescaffold_10053730 Alkaloid G8O/G8H medium borderline
Aaltescaffold_30286470 Alkaloid G8O/G8H low borderline
Aaltescaffold_30301040 Alkaloid G8O/G8H medium borderline
Aaltescaffold_30310040 Alkaloid G8O/G8H low borderline
Aaltescaffold_40347110 Alkaloid G8O/G8H medium borderline
Aaltescaffold_40352460 Alkaloid G8O/G8H medium pass
Aaltescaffold_40353420 Alkaloid G8O/G8H medium borderline
Aaltescaffold_50362340 Alkaloid G8O/G8H medium borderline
Aaltescaffold_50370440 Alkaloid G8O/G8H medium borderline
Aaltescaffold_50370770 Alkaloid G8O/G8H medium borderline
Aaltescaffold_50380470 Alkaloid G8O/G8H low borderline
Aaltescaffold_50407580 Alkaloid G8O/G8H medium borderline
Aaltescaffold_60418330 Alkaloid G8O/G8H medium borderline
Aaltescaffold_60421190 Alkaloid G8O/G8H medium borderline
Aaltescaffold_60422680 Alkaloid G8O/G8H medium borderline
Aaltescaffold_60436900 Alkaloid G8O/G8H low borderline
Aaltescaffold_60437100 Alkaloid G8O/G8H medium borderline
Aaltescaffold_70455030 Alkaloid G8O/G8H medium borderline
Aaltescaffold_80476010 Alkaloid G8O/G8H medium borderline
Aaltescaffold_80479980 Alkaloid G8O/G8H low borderline
Aaltescaffold_10070390 Alkaloid GES low borderline
Aaltescaffold_10072380 Alkaloid GES medium pass