PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

891
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Aaltescaffold_80468860 Phenylpropanoid C3'H/CYP98A low borderline
Aaltescaffold_80476010 Phenylpropanoid C3'H/CYP98A medium borderline
Aaltescaffold_80476910 Phenylpropanoid C3'H/CYP98A medium borderline
Aaltescaffold_80479680 Phenylpropanoid C3'H/CYP98A medium borderline
Aaltescaffold_80482410 Phenylpropanoid C3'H/CYP98A medium pass
Aaltescaffold_80492400 Phenylpropanoid C3'H/CYP98A low borderline
Aaltescaffold_80501090 Phenylpropanoid C3'H/CYP98A low borderline
Aaltescaffold_90506340 Phenylpropanoid C3'H/CYP98A medium borderline
Aaltescaffold_90506870 Phenylpropanoid C3'H/CYP98A low borderline
Aaltescaffold_90506930 Phenylpropanoid C3'H/CYP98A low borderline
Aaltescaffold_90506970 Phenylpropanoid C3'H/CYP98A low borderline
Aaltescaffold_90508030 Phenylpropanoid C3'H/CYP98A medium borderline
Aaltescaffold_90513580 Phenylpropanoid C3'H/CYP98A high pass
Aaltescaffold_90516700 Phenylpropanoid C3'H/CYP98A medium pass
Aaltescaffold_90517780 Phenylpropanoid C3'H/CYP98A medium borderline
Aaltescaffold_90522250 Phenylpropanoid C3'H/CYP98A medium borderline
Aaltescaffold_90522360 Phenylpropanoid C3'H/CYP98A medium borderline
Aaltescaffold_90528650 Phenylpropanoid C3'H/CYP98A low borderline
Aaltescaffold_10042190 Phenylpropanoid C4H/CYP73A low borderline
Aaltescaffold_20191630 Phenylpropanoid C4H/CYP73A low borderline
Aaltescaffold_50407960 Phenylpropanoid C4H/CYP73A low borderline
Aaltescaffold_60436900 Phenylpropanoid C4H/CYP73A low borderline
Aaltescaffold_70449840 Phenylpropanoid C4H/CYP73A low borderline
Aaltescaffold_80490410 Phenylpropanoid C4H/CYP73A low borderline
Aaltescaffold_80500950 Phenylpropanoid C4H/CYP73A medium borderline
Aaltescaffold_10011090 Phenylpropanoid CAD low borderline
Aaltescaffold_20202690 Phenylpropanoid CAD low borderline
Aaltescaffold_20211000 Phenylpropanoid CAD medium borderline
Aaltescaffold_20225280 Phenylpropanoid CAD medium pass
Aaltescaffold_20225910 Phenylpropanoid CAD low borderline
Aaltescaffold_20231960 Phenylpropanoid CAD medium pass
Aaltescaffold_30248730 Phenylpropanoid CAD medium borderline
Aaltescaffold_30279240 Phenylpropanoid CAD low borderline
Aaltescaffold_40341430 Phenylpropanoid CAD medium pass
Aaltescaffold_40341760 Phenylpropanoid CAD medium pass
Aaltescaffold_40346180 Phenylpropanoid CAD medium borderline
Aaltescaffold_40346200 Phenylpropanoid CAD medium borderline
Aaltescaffold_40346230 Phenylpropanoid CAD medium borderline
Aaltescaffold_60435640 Phenylpropanoid CAD medium borderline
Aaltescaffold_60435710 Phenylpropanoid CAD medium borderline
Aaltescaffold_80483000 Phenylpropanoid CAD low borderline
Aaltescaffold_80489660 Phenylpropanoid CAD low borderline
Aaltescaffold_80499830 Phenylpropanoid CAD low borderline
Aaltescaffold_90505780 Phenylpropanoid CAD medium borderline
Aaltescaffold_90523980 Phenylpropanoid CAD low borderline
Aaltescaffold_90524010 Phenylpropanoid CAD low borderline
Aaltescaffold_10059980 Phenylpropanoid CCR low borderline
Aaltescaffold_20183620 Phenylpropanoid CCR medium borderline
Aaltescaffold_20205000 Phenylpropanoid CCR medium pass
Aaltescaffold_30279530 Phenylpropanoid CCR low borderline