PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

891
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Aaltescaffold_80479680 Rosmarinic Acid C4H low borderline
Aaltescaffold_80482410 Rosmarinic Acid C4H low borderline
Aaltescaffold_80490410 Rosmarinic Acid C4H low borderline
Aaltescaffold_80492400 Rosmarinic Acid C4H low borderline
Aaltescaffold_80500950 Rosmarinic Acid C4H medium pass
Aaltescaffold_80501090 Rosmarinic Acid C4H low borderline
Aaltescaffold_90506340 Rosmarinic Acid C4H medium pass
Aaltescaffold_90506870 Rosmarinic Acid C4H low borderline
Aaltescaffold_90506930 Rosmarinic Acid C4H low borderline
Aaltescaffold_90508030 Rosmarinic Acid C4H low borderline
Aaltescaffold_90513580 Rosmarinic Acid C4H low borderline
Aaltescaffold_90516700 Rosmarinic Acid C4H low borderline
Aaltescaffold_90517780 Rosmarinic Acid C4H low borderline
Aaltescaffold_90522250 Rosmarinic Acid C4H low borderline
Aaltescaffold_90522360 Rosmarinic Acid C4H low borderline
Aaltescaffold_90528650 Rosmarinic Acid C4H low borderline
Aaltescaffold_100096480 Rosmarinic Acid CPR low borderline
Aaltescaffold_110159080 Rosmarinic Acid CPR medium pass
Aaltescaffold_20193580 Rosmarinic Acid CPR medium pass
Aaltescaffold_30312510 Rosmarinic Acid CPR medium pass
Aaltescaffold_50366040 Rosmarinic Acid CPR medium pass
Aaltescaffold_90515190 Rosmarinic Acid CPR low borderline
Aaltescaffold_10075170 Rosmarinic Acid HPPR medium pass
Aaltescaffold_10001710 Rosmarinic Acid PAL high pass
Aaltescaffold_10001740 Rosmarinic Acid PAL medium pass
Aaltescaffold_10001750 Rosmarinic Acid PAL medium pass
Aaltescaffold_10004130 Rosmarinic Acid PAL medium pass
Aaltescaffold_10004140 Rosmarinic Acid PAL medium pass
Aaltescaffold_10004200 Rosmarinic Acid PAL high pass
Aaltescaffold_10004250 Rosmarinic Acid PAL high pass
Aaltescaffold_10004390 Rosmarinic Acid PAL high pass
Aaltescaffold_10004420 Rosmarinic Acid PAL high pass
Aaltescaffold_10004460 Rosmarinic Acid PAL high pass
Aaltescaffold_10004500 Rosmarinic Acid PAL high pass
Aaltescaffold_10007050 Rosmarinic Acid PAL medium pass
Aaltescaffold_10007060 Rosmarinic Acid PAL high pass
Aaltescaffold_10007090 Rosmarinic Acid PAL high pass
Aaltescaffold_100086850 Rosmarinic Acid PAL medium pass
Aaltescaffold_100086890 Rosmarinic Acid PAL medium pass
Aaltescaffold_100087080 Rosmarinic Acid PAL low borderline
Aaltescaffold_10061790 Rosmarinic Acid PAL high pass
Aaltescaffold_110138000 Rosmarinic Acid PAL low borderline
Aaltescaffold_20189550 Rosmarinic Acid PAL low borderline
Aaltescaffold_20191420 Rosmarinic Acid PAL high pass
Aaltescaffold_20207230 Rosmarinic Acid PAL medium pass
Aaltescaffold_20210370 Rosmarinic Acid PAL low borderline
Aaltescaffold_20227370 Rosmarinic Acid PAL high pass
Aaltescaffold_20227430 Rosmarinic Acid PAL high pass
Aaltescaffold_30290750 Rosmarinic Acid PAL high pass
Aaltescaffold_30301550 Rosmarinic Acid PAL high pass