PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

1162
Candidate Protein Records
891
Pathway-Level Records
2303
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Aaltescaffold_160178820 Phenylpropanoid CSE low borderline
Aaltescaffold_20192910 Phenylpropanoid CSE medium pass
Aaltescaffold_20204460 Phenylpropanoid CSE medium pass
Aaltescaffold_20208110 Phenylpropanoid CSE medium pass
Aaltescaffold_30287050 Phenylpropanoid CSE medium pass
Aaltescaffold_40345970 Phenylpropanoid CSE medium pass
Aaltescaffold_50365790 Phenylpropanoid CSE medium pass
Aaltescaffold_50396250 Phenylpropanoid CSE medium pass
Aaltescaffold_60421060 Phenylpropanoid CSE low borderline
Aaltescaffold_70446440 Phenylpropanoid CSE medium pass
Aaltescaffold_90517540 Phenylpropanoid CSE low borderline
Aaltescaffold_90517600 Phenylpropanoid CSE low borderline
Aaltescaffold_90525420 Phenylpropanoid CSE medium pass
Aaltescaffold_10042180 Phenylpropanoid F5H/CYP84A medium borderline
Aaltescaffold_20211460 Phenylpropanoid F5H/CYP84A medium borderline
Aaltescaffold_30276440 Phenylpropanoid F5H/CYP84A medium borderline
Aaltescaffold_30310040 Phenylpropanoid F5H/CYP84A low borderline
Aaltescaffold_40332600 Phenylpropanoid F5H/CYP84A medium borderline
Aaltescaffold_50376940 Phenylpropanoid F5H/CYP84A medium borderline
Aaltescaffold_60421190 Phenylpropanoid F5H/CYP84A medium borderline
Aaltescaffold_60436910 Phenylpropanoid F5H/CYP84A medium borderline
Aaltescaffold_80479990 Phenylpropanoid F5H/CYP84A medium borderline
Aaltescaffold_100084650 Phenylpropanoid HCT medium pass
Aaltescaffold_10036370 Phenylpropanoid HCT medium pass
Aaltescaffold_20185580 Phenylpropanoid HCT low borderline
Aaltescaffold_40331340 Phenylpropanoid HCT medium pass
Aaltescaffold_40333540 Phenylpropanoid HCT medium pass
Aaltescaffold_60415940 Phenylpropanoid HCT medium pass
Aaltescaffold_60428620 Phenylpropanoid HCT medium pass
Aaltescaffold_60435350 Phenylpropanoid HCT medium pass
Aaltescaffold_60435370 Phenylpropanoid HCT medium pass
Aaltescaffold_60435390 Phenylpropanoid HCT low borderline
Aaltescaffold_60438950 Phenylpropanoid HCT low borderline
Aaltescaffold_80479490 Phenylpropanoid HCT medium pass
Aaltescaffold_80482220 Phenylpropanoid HCT low borderline
Aaltescaffold_80482450 Phenylpropanoid HCT low borderline
Aaltescaffold_90512220 Phenylpropanoid HCT medium pass
Aaltescaffold_100082420 Phenylpropanoid LAC medium pass
Aaltescaffold_100083690 Phenylpropanoid LAC medium pass
Aaltescaffold_100083800 Phenylpropanoid LAC medium pass
Aaltescaffold_100099150 Phenylpropanoid LAC medium pass
Aaltescaffold_100099170 Phenylpropanoid LAC medium pass
Aaltescaffold_100099180 Phenylpropanoid LAC medium pass
Aaltescaffold_10010570 Phenylpropanoid LAC medium pass
Aaltescaffold_10010880 Phenylpropanoid LAC medium pass
Aaltescaffold_20186070 Phenylpropanoid LAC medium pass
Aaltescaffold_20186080 Phenylpropanoid LAC medium pass
Aaltescaffold_20189580 Phenylpropanoid LAC medium pass
Aaltescaffold_20215150 Phenylpropanoid LAC medium pass
Aaltescaffold_20237090 Phenylpropanoid LAC medium pass