PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

1162
Candidate Protein Records
891
Pathway-Level Records
2303
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Aaltescaffold_40331340 Alkaloid PMT low borderline
Aaltescaffold_60435340 Alkaloid PMT medium pass
Aaltescaffold_80482120 Alkaloid PMT medium pass
Aaltescaffold_90512220 Alkaloid PMT low borderline
Aaltescaffold_10000820 Alkaloid PYKS high pass
Aaltescaffold_10007730 Alkaloid PYKS low borderline
Aaltescaffold_100099270 Alkaloid PYKS high pass
Aaltescaffold_100099280 Alkaloid PYKS high pass
Aaltescaffold_100099300 Alkaloid PYKS high pass
Aaltescaffold_100112070 Alkaloid PYKS high pass
Aaltescaffold_100112480 Alkaloid PYKS low borderline
Aaltescaffold_100119150 Alkaloid PYKS low borderline
Aaltescaffold_10018310 Alkaloid PYKS high pass
Aaltescaffold_10025040 Alkaloid PYKS high pass
Aaltescaffold_10025260 Alkaloid PYKS high pass
Aaltescaffold_10025480 Alkaloid PYKS high pass
Aaltescaffold_10025760 Alkaloid PYKS high pass
Aaltescaffold_10028620 Alkaloid PYKS low borderline
Aaltescaffold_110138420 Alkaloid PYKS high pass
Aaltescaffold_110154570 Alkaloid PYKS low borderline
Aaltescaffold_20199560 Alkaloid PYKS high pass
Aaltescaffold_20199570 Alkaloid PYKS high pass
Aaltescaffold_20199590 Alkaloid PYKS high pass
Aaltescaffold_20199600 Alkaloid PYKS high pass
Aaltescaffold_20199640 Alkaloid PYKS high pass
Aaltescaffold_20220470 Alkaloid PYKS high pass
Aaltescaffold_20228600 Alkaloid PYKS high pass
Aaltescaffold_20238910 Alkaloid PYKS high pass
Aaltescaffold_20239060 Alkaloid PYKS high pass
Aaltescaffold_40324390 Alkaloid PYKS low borderline
Aaltescaffold_40324720 Alkaloid PYKS low borderline
Aaltescaffold_40335590 Alkaloid PYKS high pass
Aaltescaffold_40347580 Alkaloid PYKS low borderline
Aaltescaffold_50374720 Alkaloid PYKS high pass
Aaltescaffold_50374810 Alkaloid PYKS high pass
Aaltescaffold_50383320 Alkaloid PYKS low borderline
Aaltescaffold_50407120 Alkaloid PYKS low borderline
Aaltescaffold_60431050 Alkaloid PYKS high pass
Aaltescaffold_70442480 Alkaloid PYKS high pass
Aaltescaffold_70442490 Alkaloid PYKS high pass
Aaltescaffold_70452450 Alkaloid PYKS high pass
Aaltescaffold_90532070 Alkaloid PYKS high pass
Aaltescaffold_90532110 Alkaloid PYKS high pass
Aaltescaffold_100096990 Alkaloid SGD low borderline
Aaltescaffold_100108040 Alkaloid SGD low borderline
Aaltescaffold_30301110 Alkaloid SGD low borderline
Aaltescaffold_30302570 Alkaloid SGD medium pass
Aaltescaffold_30302600 Alkaloid SGD medium pass
Aaltescaffold_70448100 Alkaloid SGD medium pass
Aaltescaffold_70452690 Alkaloid SGD medium pass