PlantSME Plant secondary metabolism enzyme database

Avicennia marina (avicennia_marina)

Imported from atlas release summary for Avicennia marina.

1629
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (174) View species results
Alkaloid pathway 359 23 7DLGT (82) View species results
Phenylpropanoid pathway 327 12 POD (122) View species results
Flavonoid pathway 235 13 UFGT (155) View species results
Rosmarinic acid pathway 150 7 C4H (56) View species results
Steroid pathway 82 11 CAS (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1428 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 317 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
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Gene Pathway Family Confidence Status Best Target
avicennia_marina_AM_00168 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
avicennia_marina_AM_00184 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
avicennia_marina_AM_02250 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
avicennia_marina_AM_02303 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
avicennia_marina_AM_02434 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
avicennia_marina_AM_02435 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
avicennia_marina_AM_02436 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
avicennia_marina_AM_03253 Phenylpropanoid CAD medium pass CAD__00009__sp_P42734_CADH9_ARATH
avicennia_marina_AM_03254 Phenylpropanoid CAD medium pass CAD__00009__sp_P42734_CADH9_ARATH
avicennia_marina_AM_03272 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
avicennia_marina_AM_03882 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
avicennia_marina_AM_03883 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
avicennia_marina_AM_05125 Phenylpropanoid CAD low borderline CAD__00012__sp_Q02972_CADH8_ARATH
avicennia_marina_AM_05584 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
avicennia_marina_AM_06021 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
avicennia_marina_AM_06067 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
avicennia_marina_AM_06347 Phenylpropanoid CAD low borderline CAD__00003__sp_A0A2P1GIW4_REDX1_CATRO
avicennia_marina_AM_06748 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
avicennia_marina_AM_07290 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
avicennia_marina_AM_07761 Phenylpropanoid CAD low borderline CAD__00008__sp_O49482_CADH5_ARATH
avicennia_marina_AM_10150 Phenylpropanoid CAD low borderline CAD__00008__sp_O49482_CADH5_ARATH
avicennia_marina_AM_10307 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
avicennia_marina_AM_10308 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
avicennia_marina_AM_10309 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
avicennia_marina_AM_10774 Phenylpropanoid CAD medium pass CAD__00004__sp_B5LAT8_CAD1_CAPAN
avicennia_marina_AM_11938 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
avicennia_marina_AM_12855 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
avicennia_marina_AM_12943 Phenylpropanoid CAD low borderline CAD__00016__sp_Q9SJ10_CADH3_ARATH
avicennia_marina_AM_13940 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
avicennia_marina_AM_14962 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
avicennia_marina_AM_15199 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
avicennia_marina_AM_15209 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
avicennia_marina_AM_15210 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
avicennia_marina_AM_15697 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
avicennia_marina_AM_16023 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
avicennia_marina_AM_16895 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
avicennia_marina_AM_17313 Phenylpropanoid CAD medium pass CAD__00011__sp_Q02971_CADH7_ARATH
avicennia_marina_AM_17962 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
avicennia_marina_AM_18516 Phenylpropanoid CAD medium pass CAD__00009__sp_P42734_CADH9_ARATH
avicennia_marina_AM_18517 Phenylpropanoid CAD medium pass CAD__00009__sp_P42734_CADH9_ARATH
avicennia_marina_AM_19679 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
avicennia_marina_AM_19693 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
avicennia_marina_AM_20901 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
avicennia_marina_AM_21126 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
avicennia_marina_AM_21736 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
avicennia_marina_AM_21737 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
avicennia_marina_AM_21755 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
avicennia_marina_AM_22111 Phenylpropanoid CAD medium pass CAD__00014__sp_Q2KNL5_CADH1_OCIBA
avicennia_marina_AM_23002 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
avicennia_marina_AM_23175 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH