PlantSME Plant secondary metabolism enzyme database

Avicennia marina (avicennia_marina)

Imported from atlas release summary for Avicennia marina.

1629
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (174) View species results
Alkaloid pathway 359 23 7DLGT (82) View species results
Phenylpropanoid pathway 327 12 POD (122) View species results
Flavonoid pathway 235 13 UFGT (155) View species results
Rosmarinic acid pathway 150 7 C4H (56) View species results
Steroid pathway 82 11 CAS (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1428 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 317 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
Reset
Gene Pathway Family Confidence Status
avicennia_marina_AM_00028 Steroid CYP90D1 low borderline
avicennia_marina_AM_00479 Steroid CYP90D1 medium borderline
avicennia_marina_AM_02091 Steroid CYP90D1 low borderline
avicennia_marina_AM_02093 Steroid CYP90D1 low borderline
avicennia_marina_AM_02372 Steroid CYP90D1 low borderline
avicennia_marina_AM_02727 Steroid CYP90D1 medium borderline
avicennia_marina_AM_02772 Steroid CYP90D1 low borderline
avicennia_marina_AM_03008 Steroid CYP90D1 low borderline
avicennia_marina_AM_03231 Steroid CYP90D1 medium borderline
avicennia_marina_AM_04800 Steroid CYP90D1 low borderline
avicennia_marina_AM_04801 Steroid CYP90D1 low borderline
avicennia_marina_AM_05072 Steroid CYP90D1 medium borderline
avicennia_marina_AM_05967 Steroid CYP90D1 low borderline
avicennia_marina_AM_07946 Steroid CYP90D1 medium borderline
avicennia_marina_AM_08219 Steroid CYP90D1 low borderline
avicennia_marina_AM_08386 Steroid CYP90D1 low borderline
avicennia_marina_AM_10644 Steroid CYP90D1 low borderline
avicennia_marina_AM_12466 Steroid CYP90D1 low borderline
avicennia_marina_AM_12546 Steroid CYP90D1 low borderline
avicennia_marina_AM_13992 Steroid CYP90D1 low borderline
avicennia_marina_AM_14722 Steroid CYP90D1 low borderline
avicennia_marina_AM_15110 Steroid CYP90D1 low borderline
avicennia_marina_AM_16107 Steroid CYP90D1 low borderline
avicennia_marina_AM_16412 Steroid CYP90D1 low borderline
avicennia_marina_AM_16601 Steroid CYP90D1 medium borderline
avicennia_marina_AM_18295 Steroid CYP90D1 low borderline
avicennia_marina_AM_18296 Steroid CYP90D1 low borderline
avicennia_marina_AM_18298 Steroid CYP90D1 low borderline
avicennia_marina_AM_19374 Steroid CYP90D1 low borderline
avicennia_marina_AM_20195 Steroid CYP90D1 low borderline
avicennia_marina_AM_21551 Steroid CYP90D1 low borderline
avicennia_marina_AM_21712 Steroid CYP90D1 medium borderline
avicennia_marina_AM_25129 Steroid CYP90D1 low borderline
avicennia_marina_AM_25143 Steroid CYP90D1 low borderline
avicennia_marina_AM_25957 Steroid CYP90D1 medium borderline
avicennia_marina_AM_27988 Steroid CYP90D1 low borderline
avicennia_marina_AM_29533 Steroid CYP90D1 medium borderline
avicennia_marina_AM_29648 Steroid CYP90D1 medium borderline
avicennia_marina_AM_33752 Steroid CYP90D1 low borderline
avicennia_marina_AM_33801 Steroid CYP90D1 medium borderline