PlantSME Plant secondary metabolism enzyme database

Avicennia marina (avicennia_marina)

Imported from atlas release summary for Avicennia marina.

1629
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (174) View species results
Alkaloid pathway 359 23 7DLGT (82) View species results
Phenylpropanoid pathway 327 12 POD (122) View species results
Flavonoid pathway 235 13 UFGT (155) View species results
Rosmarinic acid pathway 150 7 C4H (56) View species results
Steroid pathway 82 11 CAS (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1428 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 317 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
avicennia_marina_AM_00957 Alkaloid G8O/G8H low borderline
avicennia_marina_AM_02399 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_03263 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_04298 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_05252 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_09249 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_10053 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_11531 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_11867 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_11937 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_14641 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_15511 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_15521 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_16402 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_16411 Alkaloid G8O/G8H low borderline
avicennia_marina_AM_16769 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_17120 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_17388 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_18295 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_23247 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_23658 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_25379 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_25441 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_25442 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_27989 Alkaloid G8O/G8H low borderline
avicennia_marina_AM_28161 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_28513 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_29207 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_29619 Alkaloid G8O/G8H medium borderline
avicennia_marina_AM_32356 Alkaloid G8O/G8H medium borderline