PlantSME Plant secondary metabolism enzyme database

Avicennia marina (avicennia_marina)

Imported from atlas release summary for Avicennia marina.

1629
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (174) View species results
Alkaloid pathway 359 23 7DLGT (82) View species results
Phenylpropanoid pathway 327 12 POD (122) View species results
Flavonoid pathway 235 13 UFGT (155) View species results
Rosmarinic acid pathway 150 7 C4H (56) View species results
Steroid pathway 82 11 CAS (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1428 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 317 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status
avicennia_marina_AM_00827 Rosmarinic Acid RAS medium pass
avicennia_marina_AM_02958 Rosmarinic Acid RAS low borderline
avicennia_marina_AM_03814 Rosmarinic Acid RAS medium pass
avicennia_marina_AM_04086 Rosmarinic Acid RAS low borderline
avicennia_marina_AM_04528 Rosmarinic Acid RAS low borderline
avicennia_marina_AM_04576 Rosmarinic Acid RAS low borderline
avicennia_marina_AM_05746 Rosmarinic Acid RAS low borderline
avicennia_marina_AM_07359 Rosmarinic Acid RAS medium pass
avicennia_marina_AM_08294 Rosmarinic Acid RAS low borderline
avicennia_marina_AM_08565 Rosmarinic Acid RAS medium pass
avicennia_marina_AM_10041 Rosmarinic Acid RAS low borderline
avicennia_marina_AM_11005 Rosmarinic Acid RAS low borderline
avicennia_marina_AM_11996 Rosmarinic Acid RAS low borderline
avicennia_marina_AM_12330 Rosmarinic Acid RAS low borderline
avicennia_marina_AM_15595 Rosmarinic Acid RAS medium pass
avicennia_marina_AM_16946 Rosmarinic Acid RAS low borderline
avicennia_marina_AM_17143 Rosmarinic Acid RAS low borderline
avicennia_marina_AM_17205 Rosmarinic Acid RAS low borderline
avicennia_marina_AM_18850 Rosmarinic Acid RAS medium pass
avicennia_marina_AM_18851 Rosmarinic Acid RAS medium pass
avicennia_marina_AM_19523 Rosmarinic Acid RAS medium pass
avicennia_marina_AM_19524 Rosmarinic Acid RAS medium pass
avicennia_marina_AM_19526 Rosmarinic Acid RAS medium pass
avicennia_marina_AM_19527 Rosmarinic Acid RAS medium pass
avicennia_marina_AM_19528 Rosmarinic Acid RAS medium pass
avicennia_marina_AM_19529 Rosmarinic Acid RAS medium pass
avicennia_marina_AM_19768 Rosmarinic Acid RAS medium pass
avicennia_marina_AM_19776 Rosmarinic Acid RAS medium pass
avicennia_marina_AM_19777 Rosmarinic Acid RAS medium pass
avicennia_marina_AM_20152 Rosmarinic Acid RAS low borderline
avicennia_marina_AM_21344 Rosmarinic Acid RAS medium pass
avicennia_marina_AM_23482 Rosmarinic Acid RAS medium pass
avicennia_marina_AM_23483 Rosmarinic Acid RAS medium pass
avicennia_marina_AM_24424 Rosmarinic Acid RAS medium pass
avicennia_marina_AM_24553 Rosmarinic Acid RAS low borderline
avicennia_marina_AM_26592 Rosmarinic Acid RAS low borderline
avicennia_marina_AM_27402 Rosmarinic Acid RAS low borderline
avicennia_marina_AM_29637 Rosmarinic Acid RAS low borderline
avicennia_marina_AM_30219 Rosmarinic Acid RAS medium pass
avicennia_marina_AM_32222 Rosmarinic Acid RAS low borderline
avicennia_marina_AM_32697 Rosmarinic Acid RAS medium pass
avicennia_marina_AM_32965 Rosmarinic Acid RAS low borderline