PlantSME Plant secondary metabolism enzyme database

Avicennia marina (avicennia_marina)

Imported from atlas release summary for Avicennia marina.

1935
Candidate Protein Records
1629
Pathway-Level Records
3991
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 476 19 BAHD (174) View species results
Alkaloid pathway 359 23 7DLGT (82) View species results
Phenylpropanoid pathway 327 12 POD (122) View species results
Flavonoid pathway 235 13 UFGT (155) View species results
Rosmarinic acid pathway 150 7 C4H (56) View species results
Steroid pathway 82 11 CAS (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1428 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 317 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
Reset
Protein/Isoform Record Pathway Family Confidence Status
avicennia_marina_AM_24319 Alkaloid T3O medium pass
avicennia_marina_AM_25143 Alkaloid T3O medium borderline
avicennia_marina_AM_25231 Alkaloid T3O medium borderline
avicennia_marina_AM_25232 Alkaloid T3O medium borderline
avicennia_marina_AM_25443 Alkaloid T3O medium borderline
avicennia_marina_AM_25444 Alkaloid T3O medium borderline
avicennia_marina_AM_25498 Alkaloid T3O low borderline
avicennia_marina_AM_25957 Alkaloid T3O medium pass
avicennia_marina_AM_26139 Alkaloid T3O medium borderline
avicennia_marina_AM_26140 Alkaloid T3O medium borderline
avicennia_marina_AM_26426 Alkaloid T3O medium borderline
avicennia_marina_AM_27256 Alkaloid T3O medium borderline
avicennia_marina_AM_28162 Alkaloid T3O medium borderline
avicennia_marina_AM_28289 Alkaloid T3O medium pass
avicennia_marina_AM_28295 Alkaloid T3O medium pass
avicennia_marina_AM_28578 Alkaloid T3O low borderline
avicennia_marina_AM_29112 Alkaloid T3O low borderline
avicennia_marina_AM_29514 Alkaloid T3O medium borderline
avicennia_marina_AM_29531 Alkaloid T3O low borderline
avicennia_marina_AM_29648 Alkaloid T3O medium pass
avicennia_marina_AM_29743 Alkaloid T3O medium pass
avicennia_marina_AM_29883 Alkaloid T3O medium pass
avicennia_marina_AM_30522 Alkaloid T3O low borderline
avicennia_marina_AM_30964 Alkaloid T3O medium borderline
avicennia_marina_AM_31173 Alkaloid T3O medium pass
avicennia_marina_AM_31336 Alkaloid T3O medium pass
avicennia_marina_AM_31349 Alkaloid T3O medium borderline
avicennia_marina_AM_31528 Alkaloid T3O medium pass
avicennia_marina_AM_31553 Alkaloid T3O medium borderline
avicennia_marina_AM_31563 Alkaloid T3O medium pass
avicennia_marina_AM_32973 Alkaloid T3O medium pass
avicennia_marina_AM_33209 Alkaloid T3O medium pass
avicennia_marina_AM_33219 Alkaloid T3O medium borderline
avicennia_marina_AM_33385 Alkaloid T3O medium borderline
avicennia_marina_AM_33574 Alkaloid T3O medium pass
avicennia_marina_AM_33752 Alkaloid T3O medium borderline
avicennia_marina_AM_33801 Alkaloid T3O medium pass