PlantSME Plant secondary metabolism enzyme database

Avicennia marina (avicennia_marina)

Imported from atlas release summary for Avicennia marina.

1629
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (174) View species results
Alkaloid pathway 359 23 7DLGT (82) View species results
Phenylpropanoid pathway 327 12 POD (122) View species results
Flavonoid pathway 235 13 UFGT (155) View species results
Rosmarinic acid pathway 150 7 C4H (56) View species results
Steroid pathway 82 11 CAS (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1428 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 317 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
avicennia_marina_AM_08672 Flavonoid UFGT high pass
avicennia_marina_AM_08675 Flavonoid UFGT high pass
avicennia_marina_AM_08677 Flavonoid UFGT high pass
avicennia_marina_AM_08678 Flavonoid UFGT high pass
avicennia_marina_AM_08756 Flavonoid UFGT medium pass
avicennia_marina_AM_09222 Flavonoid UFGT high pass
avicennia_marina_AM_09223 Flavonoid UFGT medium pass
avicennia_marina_AM_09258 Flavonoid UFGT high pass
avicennia_marina_AM_09259 Flavonoid UFGT high pass
avicennia_marina_AM_09260 Flavonoid UFGT high pass
avicennia_marina_AM_09261 Flavonoid UFGT high pass
avicennia_marina_AM_09262 Flavonoid UFGT high pass
avicennia_marina_AM_09263 Flavonoid UFGT high pass
avicennia_marina_AM_09484 Flavonoid UFGT low borderline
avicennia_marina_AM_10102 Flavonoid UFGT high pass
avicennia_marina_AM_10103 Flavonoid UFGT medium pass
avicennia_marina_AM_10628 Flavonoid UFGT high pass
avicennia_marina_AM_11453 Flavonoid UFGT medium pass
avicennia_marina_AM_11454 Flavonoid UFGT high pass
avicennia_marina_AM_11455 Flavonoid UFGT high pass
avicennia_marina_AM_11474 Flavonoid UFGT high pass
avicennia_marina_AM_11475 Flavonoid UFGT medium pass
avicennia_marina_AM_11665 Flavonoid UFGT high pass
avicennia_marina_AM_11706 Flavonoid UFGT medium pass
avicennia_marina_AM_12212 Flavonoid UFGT medium pass
avicennia_marina_AM_13297 Flavonoid UFGT high pass
avicennia_marina_AM_13298 Flavonoid UFGT high pass
avicennia_marina_AM_14216 Flavonoid UFGT medium pass
avicennia_marina_AM_14401 Flavonoid UFGT medium pass
avicennia_marina_AM_14814 Flavonoid UFGT low borderline
avicennia_marina_AM_15932 Flavonoid UFGT medium pass
avicennia_marina_AM_15933 Flavonoid UFGT medium pass
avicennia_marina_AM_15934 Flavonoid UFGT medium pass
avicennia_marina_AM_15935 Flavonoid UFGT medium pass
avicennia_marina_AM_15936 Flavonoid UFGT medium pass
avicennia_marina_AM_15937 Flavonoid UFGT low borderline
avicennia_marina_AM_15938 Flavonoid UFGT medium pass
avicennia_marina_AM_15939 Flavonoid UFGT medium pass
avicennia_marina_AM_15940 Flavonoid UFGT medium pass
avicennia_marina_AM_16039 Flavonoid UFGT medium pass
avicennia_marina_AM_16367 Flavonoid UFGT high pass
avicennia_marina_AM_16441 Flavonoid UFGT medium pass
avicennia_marina_AM_16476 Flavonoid UFGT medium pass
avicennia_marina_AM_16519 Flavonoid UFGT high pass
avicennia_marina_AM_16629 Flavonoid UFGT medium pass
avicennia_marina_AM_17251 Flavonoid UFGT medium pass
avicennia_marina_AM_17613 Flavonoid UFGT high pass
avicennia_marina_AM_17759 Flavonoid UFGT medium pass
avicennia_marina_AM_17857 Flavonoid UFGT medium pass
avicennia_marina_AM_18430 Flavonoid UFGT high pass