PlantSME Plant secondary metabolism enzyme database

Avicennia marina (avicennia_marina)

Imported from atlas release summary for Avicennia marina.

1629
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (174) View species results
Alkaloid pathway 359 23 7DLGT (82) View species results
Phenylpropanoid pathway 327 12 POD (122) View species results
Flavonoid pathway 235 13 UFGT (155) View species results
Rosmarinic acid pathway 150 7 C4H (56) View species results
Steroid pathway 82 11 CAS (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1428 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 317 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
avicennia_marina_AM_18447 Flavonoid UFGT medium pass
avicennia_marina_AM_19020 Flavonoid UFGT high pass
avicennia_marina_AM_19021 Flavonoid UFGT medium pass
avicennia_marina_AM_19366 Flavonoid UFGT high pass
avicennia_marina_AM_19537 Flavonoid UFGT high pass
avicennia_marina_AM_19915 Flavonoid UFGT medium pass
avicennia_marina_AM_19916 Flavonoid UFGT high pass
avicennia_marina_AM_19917 Flavonoid UFGT low borderline
avicennia_marina_AM_20589 Flavonoid UFGT low borderline
avicennia_marina_AM_20590 Flavonoid UFGT medium pass
avicennia_marina_AM_20591 Flavonoid UFGT medium pass
avicennia_marina_AM_20592 Flavonoid UFGT high pass
avicennia_marina_AM_21903 Flavonoid UFGT medium pass
avicennia_marina_AM_21926 Flavonoid UFGT high pass
avicennia_marina_AM_21927 Flavonoid UFGT medium pass
avicennia_marina_AM_22094 Flavonoid UFGT high pass
avicennia_marina_AM_22096 Flavonoid UFGT medium pass
avicennia_marina_AM_22112 Flavonoid UFGT medium pass
avicennia_marina_AM_22810 Flavonoid UFGT low borderline
avicennia_marina_AM_22811 Flavonoid UFGT high pass
avicennia_marina_AM_23009 Flavonoid UFGT high pass
avicennia_marina_AM_23040 Flavonoid UFGT high pass
avicennia_marina_AM_23104 Flavonoid UFGT medium pass
avicennia_marina_AM_23212 Flavonoid UFGT medium pass
avicennia_marina_AM_23864 Flavonoid UFGT high pass
avicennia_marina_AM_23880 Flavonoid UFGT high pass
avicennia_marina_AM_23881 Flavonoid UFGT high pass
avicennia_marina_AM_24281 Flavonoid UFGT medium pass
avicennia_marina_AM_24607 Flavonoid UFGT high pass
avicennia_marina_AM_24732 Flavonoid UFGT high pass
avicennia_marina_AM_24733 Flavonoid UFGT high pass
avicennia_marina_AM_24796 Flavonoid UFGT high pass
avicennia_marina_AM_25682 Flavonoid UFGT medium pass
avicennia_marina_AM_26343 Flavonoid UFGT medium pass
avicennia_marina_AM_26366 Flavonoid UFGT medium pass
avicennia_marina_AM_26367 Flavonoid UFGT medium pass
avicennia_marina_AM_26368 Flavonoid UFGT medium pass
avicennia_marina_AM_26370 Flavonoid UFGT high pass
avicennia_marina_AM_26601 Flavonoid UFGT medium pass
avicennia_marina_AM_26714 Flavonoid UFGT high pass
avicennia_marina_AM_26788 Flavonoid UFGT medium pass
avicennia_marina_AM_27389 Flavonoid UFGT high pass
avicennia_marina_AM_28097 Flavonoid UFGT high pass
avicennia_marina_AM_28098 Flavonoid UFGT high pass
avicennia_marina_AM_28099 Flavonoid UFGT high pass
avicennia_marina_AM_28434 Flavonoid UFGT medium pass
avicennia_marina_AM_28436 Flavonoid UFGT medium pass
avicennia_marina_AM_30009 Flavonoid UFGT medium pass
avicennia_marina_AM_30010 Flavonoid UFGT high pass
avicennia_marina_AM_31454 Flavonoid UFGT medium pass