Avicennia marina (avicennia_marina)
Imported from atlas release summary for Avicennia marina.
1629
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1629
Candidate Genes
BAHD
5.81%
C3'H/CYP98A
5.66%
C4H
5.46%
UGT
4.76%
4CL
4.74%
7DLGT
4.31%
UFGT
4.16%
IFS
3.98%
Other Families
61.11%
More Families (97)
CYP76
146
3.66%
POD
139
3.48%
T3O
137
3.43%
F3H
106
2.66%
DWF4/CYP90B1
85
2.13%
NMT
79
1.98%
CAD
76
1.9%
F3'H/CYP75B
72
1.8%
CODM/T6ODM
68
1.7%
BR6OX2/CYP85A2
61
1.53%
STR
56
1.4%
SMT1/SMT2/SMT3
53
1.33%
H6H
50
1.25%
LAC
45
1.13%
IFR
44
1.1%
TRI/TRII
43
1.08%
GS
43
1.08%
HCT
43
1.08%
CYP71
43
1.08%
RAS
42
1.05%
CAS
42
1.05%
CYP90D1
40
1.0%
PMT
38
0.95%
PYKS
37
0.93%
ANR
36
0.9%
IO
32
0.8%
T16H
31
0.78%
TPS
31
0.78%
G8O/G8H
30
0.75%
SGD
29
0.73%
GES
28
0.7%
NCS
27
0.68%
COMT
27
0.68%
SLS
25
0.63%
8HGO
24
0.6%
CSE
24
0.6%
CPD/CYP90A1
24
0.6%
FNS
21
0.53%
TAT
21
0.53%
CCR
20
0.5%
CYP51G1
18
0.45%
ANS/LDOX
17
0.43%
F3'5'H/CYP75A
16
0.4%
FPPS
16
0.4%
GGPPS
16
0.4%
CNMT
15
0.38%
7DLH
15
0.38%
PAL
15
0.38%
AACT
14
0.35%
HPPR
13
0.33%
BR6OX1/CYP85A1
13
0.33%
COR
12
0.3%
CHS
12
0.3%
ROT3/CYP90C1
12
0.3%
DFR
11
0.28%
16OMT
10
0.25%
LAMT
10
0.25%
F5H/CYP84A
10
0.25%
MPO
9
0.23%
CCoAOMT
9
0.23%
CPR
9
0.23%
6OMT_4OMT_SOMT
8
0.2%
CYP80B1
8
0.2%
SQS/FDFT1
8
0.2%
SQE
8
0.2%
ISY
7
0.18%
ADC
7
0.18%
HMGR
7
0.18%
DXS
7
0.18%
TYDC_DDC
6
0.15%
FLS
6
0.15%
SMO1/SMO2
6
0.15%
MVD
6
0.15%
MVK
6
0.15%
TDC
5
0.13%
CYP719
5
0.13%
MCT/IspD
5
0.13%
HMGS
4
0.1%
IDI
4
0.1%
BBE
3
0.08%
XMT_MXMT_DXMT
3
0.08%
CHI
3
0.08%
DET2
3
0.08%
ODC
2
0.05%
CYP80F1
2
0.05%
CPI1
2
0.05%
DWF1
2
0.05%
CMK/IspE
2
0.05%
HDS/IspG
2
0.05%
MDS/IspF
2
0.05%
DXR
2
0.05%
HDR/IspH
2
0.05%
PMK
2
0.05%
DWF7
1
0.03%
DWF5
1
0.03%
FK
1
0.03%
HYD1
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 476 | 19 | BAHD (174) | View species results |
| Alkaloid pathway | 359 | 23 | 7DLGT (82) | View species results |
| Phenylpropanoid pathway | 327 | 12 | POD (122) | View species results |
| Flavonoid pathway | 235 | 13 | UFGT (155) | View species results |
| Rosmarinic acid pathway | 150 | 7 | C4H (56) | View species results |
| Steroid pathway | 82 | 11 | CAS (33) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1428 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 317 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| avicennia_marina_AM_07310 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| avicennia_marina_AM_07311 | Terpenoid | UGT | low | borderline | UGT__00114__sp_U3THC0_FG2KI_SOYBN |
| avicennia_marina_AM_08558 | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| avicennia_marina_AM_08672 | Terpenoid | UGT | medium | pass | UGT__00109__sp_Q9ZQ94_U73C5_ARATH |
| avicennia_marina_AM_08673 | Terpenoid | UGT | medium | pass | UGT__00041__sp_K4GGT4_73C11_BARVU |
| avicennia_marina_AM_08674 | Terpenoid | UGT | medium | pass | UGT__00040__sp_K4D422_U73C4_SOLLC |
| avicennia_marina_AM_08675 | Terpenoid | UGT | medium | pass | UGT__00044__sp_K4GIP0_73C12_BARVU |
| avicennia_marina_AM_08676 | Terpenoid | UGT | low | borderline | UGT__00019__sp_A0A2R4LMF9_73C25_BARVU |
| avicennia_marina_AM_08677 | Terpenoid | UGT | medium | pass | UGT__00110__sp_Q9ZQ95_U73C6_ARATH |
| avicennia_marina_AM_08678 | Terpenoid | UGT | medium | pass | UGT__00109__sp_Q9ZQ94_U73C5_ARATH |
| avicennia_marina_AM_08756 | Terpenoid | UGT | medium | pass | UGT__00022__sp_B2XBQ5_85A19_PRUDU |
| avicennia_marina_AM_09222 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| avicennia_marina_AM_09223 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| avicennia_marina_AM_09258 | Terpenoid | UGT | medium | pass | UGT__00108__sp_Q9SYK9_U74E2_ARATH |
| avicennia_marina_AM_09259 | Terpenoid | UGT | medium | pass | UGT__00108__sp_Q9SYK9_U74E2_ARATH |
| avicennia_marina_AM_09260 | Terpenoid | UGT | medium | pass | UGT__00108__sp_Q9SYK9_U74E2_ARATH |
| avicennia_marina_AM_09261 | Terpenoid | UGT | medium | pass | UGT__00108__sp_Q9SYK9_U74E2_ARATH |
| avicennia_marina_AM_09262 | Terpenoid | UGT | medium | pass | UGT__00047__sp_K7NBW3_74AC1_SIRGR |
| avicennia_marina_AM_09263 | Terpenoid | UGT | medium | pass | UGT__00047__sp_K7NBW3_74AC1_SIRGR |
| avicennia_marina_AM_09368 | Terpenoid | UGT | medium | pass | UGT__00067__sp_P0DO74_GT742_SIRGR |
| avicennia_marina_AM_09369 | Terpenoid | UGT | medium | pass | UGT__00047__sp_K7NBW3_74AC1_SIRGR |
| avicennia_marina_AM_10102 | Terpenoid | UGT | medium | pass | UGT__00001__sp_A0A067YB04_UGT1_PUEML |
| avicennia_marina_AM_10103 | Terpenoid | UGT | medium | pass | UGT__00001__sp_A0A067YB04_UGT1_PUEML |
| avicennia_marina_AM_10628 | Terpenoid | UGT | medium | pass | UGT__00067__sp_P0DO74_GT742_SIRGR |
| avicennia_marina_AM_11210 | Terpenoid | UGT | low | borderline | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| avicennia_marina_AM_11453 | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| avicennia_marina_AM_11454 | Terpenoid | UGT | low | borderline | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| avicennia_marina_AM_11455 | Terpenoid | UGT | low | borderline | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| avicennia_marina_AM_11474 | Terpenoid | UGT | medium | pass | UGT__00018__sp_A0A224AM54_708G1_CITJP |
| avicennia_marina_AM_11475 | Terpenoid | UGT | medium | pass | UGT__00017__sp_A0A224AKZ9_708G2_CITUN |
| avicennia_marina_AM_11665 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| avicennia_marina_AM_11706 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| avicennia_marina_AM_12212 | Terpenoid | UGT | medium | pass | UGT__00115__sp_U3U992_UGT8_CATRO |
| avicennia_marina_AM_13079 | Terpenoid | UGT | medium | pass | UGT__00111__sp_Q9ZQ99_U73C1_ARATH |
| avicennia_marina_AM_13297 | Terpenoid | UGT | medium | pass | UGT__00115__sp_U3U992_UGT8_CATRO |
| avicennia_marina_AM_13298 | Terpenoid | UGT | medium | pass | UGT__00117__sp_U5NH37_7DLGT_CATRO |
| avicennia_marina_AM_14216 | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| avicennia_marina_AM_14341 | Terpenoid | UGT | low | borderline | UGT__00055__sp_O48676_U74B1_ARATH |
| avicennia_marina_AM_14342 | Terpenoid | UGT | low | borderline | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| avicennia_marina_AM_14401 | Terpenoid | UGT | medium | pass | UGT__00102__sp_Q9LZD8_U89A2_ARATH |
| avicennia_marina_AM_15932 | Terpenoid | UGT | medium | pass | UGT__00081__sp_Q9C768_U76B1_ARATH |
| avicennia_marina_AM_15933 | Terpenoid | UGT | medium | pass | UGT__00078__sp_Q8W491_U73B3_ARATH |
| avicennia_marina_AM_15934 | Terpenoid | UGT | medium | pass | UGT__00106__sp_Q9SKC5_U74D1_ARATH |
| avicennia_marina_AM_15935 | Terpenoid | UGT | low | borderline | UGT__00013__sp_A0A172J2D0_UGT2_PUEML |
| avicennia_marina_AM_15936 | Terpenoid | UGT | medium | pass | UGT__00110__sp_Q9ZQ95_U73C6_ARATH |
| avicennia_marina_AM_15937 | Terpenoid | UGT | low | borderline | UGT__00002__sp_A0A067YBQ3_UGT13_PUEML |
| avicennia_marina_AM_15938 | Terpenoid | UGT | low | borderline | UGT__00001__sp_A0A067YB04_UGT1_PUEML |
| avicennia_marina_AM_15939 | Terpenoid | UGT | medium | pass | UGT__00110__sp_Q9ZQ95_U73C6_ARATH |
| avicennia_marina_AM_15940 | Terpenoid | UGT | low | borderline | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| avicennia_marina_AM_16039 | Terpenoid | UGT | medium | pass | UGT__00116__sp_U3UA11_UGT7_CATRO |