PlantSME Plant secondary metabolism enzyme database

Avicennia marina (avicennia_marina)

Imported from atlas release summary for Avicennia marina.

1629
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (174) View species results
Alkaloid pathway 359 23 7DLGT (82) View species results
Phenylpropanoid pathway 327 12 POD (122) View species results
Flavonoid pathway 235 13 UFGT (155) View species results
Rosmarinic acid pathway 150 7 C4H (56) View species results
Steroid pathway 82 11 CAS (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1428 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 317 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
Reset
Gene Pathway Family Confidence Status
avicennia_marina_AM_04936 Steroid DET2 medium pass
avicennia_marina_AM_24549 Steroid DET2 low borderline
avicennia_marina_AM_33307 Steroid DET2 low borderline
avicennia_marina_AM_25148 Steroid DWF1 medium pass
avicennia_marina_AM_31167 Steroid DWF1 medium pass
avicennia_marina_AM_00047 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_00150 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_00226 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_00895 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_00929 Steroid DWF4/CYP90B1 medium borderline
avicennia_marina_AM_01286 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_01287 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_03007 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_03088 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_03090 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_03091 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_03956 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_04298 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_04497 Steroid DWF4/CYP90B1 medium borderline
avicennia_marina_AM_04898 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_05457 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_07286 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_07367 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_07589 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_08473 Steroid DWF4/CYP90B1 medium borderline
avicennia_marina_AM_08504 Steroid DWF4/CYP90B1 medium borderline
avicennia_marina_AM_09147 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_09148 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_09341 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_10363 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_10380 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_11255 Steroid DWF4/CYP90B1 medium borderline
avicennia_marina_AM_11310 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_11424 Steroid DWF4/CYP90B1 medium borderline
avicennia_marina_AM_11867 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_12181 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_12230 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_13131 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_13142 Steroid DWF4/CYP90B1 medium borderline
avicennia_marina_AM_13683 Steroid DWF4/CYP90B1 medium borderline
avicennia_marina_AM_13933 Steroid DWF4/CYP90B1 medium borderline
avicennia_marina_AM_14381 Steroid DWF4/CYP90B1 medium borderline
avicennia_marina_AM_14394 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_14396 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_14708 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_15321 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_15381 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_15794 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_16400 Steroid DWF4/CYP90B1 low borderline
avicennia_marina_AM_16401 Steroid DWF4/CYP90B1 low borderline