PlantSME Plant secondary metabolism enzyme database

Avicennia marina (avicennia_marina)

Imported from atlas release summary for Avicennia marina.

1629
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (174) View species results
Alkaloid pathway 359 23 7DLGT (82) View species results
Phenylpropanoid pathway 327 12 POD (122) View species results
Flavonoid pathway 235 13 UFGT (155) View species results
Rosmarinic acid pathway 150 7 C4H (56) View species results
Steroid pathway 82 11 CAS (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1428 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 317 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
avicennia_marina_AM_25020 Alkaloid CNMT low borderline
avicennia_marina_AM_27520 Alkaloid CNMT low borderline
avicennia_marina_AM_32852 Alkaloid CNMT low borderline
avicennia_marina_AM_33367 Alkaloid CNMT low borderline
avicennia_marina_AM_01039 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_01299 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_01300 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_01551 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_02045 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_02084 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_02098 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_02551 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_03616 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_04289 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_04856 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_04912 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_04915 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_05374 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_05444 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_07284 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_07467 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_07842 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_09992 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_10404 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_10753 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_11736 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_11796 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_12210 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_12226 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_12250 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_12251 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_14028 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_14740 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_18119 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_18576 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_18635 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_18652 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_19737 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_19747 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_19928 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_20654 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_20841 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_21074 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_21868 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_22127 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_22664 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_22666 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_22667 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_22668 Alkaloid CODM/T6ODM medium borderline
avicennia_marina_AM_22849 Alkaloid CODM/T6ODM medium borderline