PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
BhybBhD30224460.1 Rosmarinic Acid C4H medium pass
BhybBhD30226180.1 Rosmarinic Acid C4H low borderline
BhybBhD30227760.1 Rosmarinic Acid C4H low borderline
BhybBhD30232520.1 Rosmarinic Acid C4H low borderline
BhybBhD30232530.1 Rosmarinic Acid C4H low borderline
BhybBhD30232600.1 Rosmarinic Acid C4H medium pass
BhybBhD30233780.1 Rosmarinic Acid C4H low borderline
BhybBhD30233780.2 Rosmarinic Acid C4H low borderline
BhybBhD30238750.1 Rosmarinic Acid C4H low borderline
BhybBhD30238760.1 Rosmarinic Acid C4H low borderline
BhybBhD30240060.1 Rosmarinic Acid C4H medium pass
BhybBhD30240080.1 Rosmarinic Acid C4H low borderline
BhybBhD30240480.1 Rosmarinic Acid C4H medium pass
BhybBhD30240500.1 Rosmarinic Acid C4H medium pass
BhybBhD30240630.1 Rosmarinic Acid C4H low borderline
BhybBhD30241040.1 Rosmarinic Acid C4H low borderline
BhybBhD30242830.1 Rosmarinic Acid C4H medium pass
BhybBhD30243330.1 Rosmarinic Acid C4H low borderline
BhybBhD30247800.1 Rosmarinic Acid C4H low borderline
BhybBhD30249040.1 Rosmarinic Acid C4H low borderline
BhybBhD30249090.1 Rosmarinic Acid C4H medium pass
BhybBhD30249100.1 Rosmarinic Acid C4H medium pass
BhybBhD30250260.1 Rosmarinic Acid C4H medium pass
BhybBhD30251050.1 Rosmarinic Acid C4H medium pass
BhybBhD30251070.1 Rosmarinic Acid C4H medium pass
BhybBhD30257100.1 Rosmarinic Acid C4H low borderline
BhybBhD30263810.1 Rosmarinic Acid C4H low borderline
BhybBhD40275230.1 Rosmarinic Acid C4H low borderline
BhybBhD40279310.1 Rosmarinic Acid C4H low borderline
BhybBhD40279410.1 Rosmarinic Acid C4H low borderline
BhybBhD40279420.1 Rosmarinic Acid C4H low borderline
BhybBhD40279430.1 Rosmarinic Acid C4H low borderline
BhybBhD40281510.1 Rosmarinic Acid C4H medium pass
BhybBhD40281570.1 Rosmarinic Acid C4H low borderline
BhybBhD40281580.1 Rosmarinic Acid C4H low borderline
BhybBhD40281910.1 Rosmarinic Acid C4H low borderline
BhybBhD40285100.1 Rosmarinic Acid C4H medium pass
BhybBhD40287420.1 Rosmarinic Acid C4H low borderline
BhybBhD40287430.1 Rosmarinic Acid C4H low borderline
BhybBhD40287450.1 Rosmarinic Acid C4H low borderline
BhybBhD40287480.1 Rosmarinic Acid C4H low borderline
BhybBhD40287480.2 Rosmarinic Acid C4H low borderline
BhybBhD40287530.1 Rosmarinic Acid C4H low borderline
BhybBhD40296570.1 Rosmarinic Acid C4H low borderline
BhybBhD40298950.1 Rosmarinic Acid C4H low borderline
BhybBhD40307490.1 Rosmarinic Acid C4H low borderline
BhybBhD40307490.2 Rosmarinic Acid C4H low borderline
BhybBhD40312330.1 Rosmarinic Acid C4H low borderline
BhybBhD40314280.1 Rosmarinic Acid C4H low borderline
BhybBhD40314300.1 Rosmarinic Acid C4H medium pass